| Protein: | pde-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 664 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pde-1.
| Description | E-value | Query Range |
Subject Range |
|
|
635.0 | [0..14] | [664..133] |
|
Region A: Residues: [1-138] |
1 11 21 31 41 51
| | | | | |
1 MNRARKTSSC GCFRSAFCLL KPSTSSASEE HGDSDKKLLS VQLITPRDEE EQTSSRSIKI 60
61 PPLDLNGLDC KKNAVAARRA GRRRTSEGGG VRGKGHFAEV VLDGLQRPVS LLRNQKEKSN 120
121 SDDNCQEKEP TSPSSSRK
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [139-252] |
1 11 21 31 41 51
| | | | | |
1 KSYDNAPALE SLEKLRYILH QLNSGQLPLE DLKRNIEYAA LVLETAYMDE TRRICDEDDD 60
61 LAEVTPETVP DEVREWLAAT FTRQNAGKKR DKPKFKSVAN AIRTGIFFEK LFRK
|
| Detection Method: | |
| Confidence: | 29.886057 |
| Match: | PF08499.3 |
| Description: | No description for PF08499.3 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [253-664] |
1 11 21 31 41 51
| | | | | |
1 QQVVQCPIPP EIAELMKEVC TWSFSPFQLN EVSEGHALKY VGFELFNRYG FMDRFKVPLT 60
61 ALENYLSALE VGYSKHNNPY HNVVHAADVT QSSHFMLSQT GLANSLGDLE LLAVLFGALI 120
121 HDYEHTGHTN NFHIQSQSQF AMLYNDRSVL ENHHVSSCFR LMKEDDKNIL THLTRDEYKE 180
181 LRNMVIEIVL ATDMSTHFMQ IKTMKSMLSL PEGIDKNKAL CLIVHACDIS HPAKPWNLHE 240
241 RWTEGVLEEF FRQGDLEASM GLPYSPLCDR HTVHVADSQI GFIDFIVEPT MVVCGELLVK 300
301 MVEPLVSLPP TDSLFPPSVD GGDDKSPSNA LSPLPDLRNS STSPSSIRRI PLNYAGKLDI 360
361 PTPWMKFLHE NKAHWKERAA KEEEERKIKE AAEAEAAAKQ VEENKENGVT TN
|
| Detection Method: | |
| Confidence: | 106.0 |
| Match: | 1tazA |
| Description: | Catalytic Domain Of Human Phosphodiesterase 1B |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| 3',5'-cyclic-GMP phosphodiesterase activity | 4.00066983687916 | bayes_pls_golite062009 |
| 3',5'-cyclic-nucleotide phosphodiesterase activity | 3.67241800633934 | bayes_pls_golite062009 |
| cyclic-nucleotide phosphodiesterase activity | 3.66153187976312 | bayes_pls_golite062009 |
| phosphoric diester hydrolase activity | 3.35655066482707 | bayes_pls_golite062009 |
| 3',5'-cyclic-AMP phosphodiesterase activity | 2.18711955312275 | bayes_pls_golite062009 |
| hydrolase activity | 1.17086565360856 | bayes_pls_golite062009 |
| catalytic activity | 1.07048165010262 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 0.98531713516841 | bayes_pls_golite062009 |
| binding | 0.585341229695032 | bayes_pls_golite062009 |
| phosphoric ester hydrolase activity | 0.511207383357891 | bayes_pls_golite062009 |
| protein binding | 0.062487758537192 | bayes_pls_golite062009 |
