| Protein: | aha-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 453 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for aha-1.
| Description | E-value | Query Range |
Subject Range |
|
|
227.0 | [0..1] | [453..1] |
|
Region A: Residues: [1-112] |
1 11 21 31 41 51
| | | | | |
1 MAQDIFMDPW QSATSFAMED EDMGMPSGKY ARMEDEMGEN KERFARENHS EIERRRRNKM 60
61 THYINELAEM VPQCASLGRK PDKLTILRMA VSHMKGIRGH TAQDETSYKP SF
|
| Detection Method: |  |
| Confidence: | 5.522879 |
| Match: | 1am9A |
| Description: | SREBP-1a |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 5.38658950816179 | bayes_pls_golite062009 |
| DNA binding | 5.18654839258297 | bayes_pls_golite062009 |
| nucleic acid binding | 5.05768805749761 | bayes_pls_golite062009 |
| transcription factor activity | 4.78039531631248 | bayes_pls_golite062009 |
| transcription activator activity | 3.87875547821718 | bayes_pls_golite062009 |
| binding | 3.81829206350975 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 3.42035985454056 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 3.39500382187264 | bayes_pls_golite062009 |
| protein binding | 2.64975291677725 | bayes_pls_golite062009 |
| transcription factor binding | 2.61163564741984 | bayes_pls_golite062009 |
| transcription repressor activity | 2.58751248599889 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity, enhancer binding | 2.42306484786159 | bayes_pls_golite062009 |
| transcription corepressor activity | 2.03674713048499 | bayes_pls_golite062009 |
| transcription cofactor activity | 1.52770895937238 | bayes_pls_golite062009 |
| promoter binding | 0.8576109846276 | bayes_pls_golite062009 |
| protein heterodimerization activity | 0.53175615551166 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.3513586903977 | bayes_pls_golite062009 |
| protein dimerization activity | 0.20674648626116 | bayes_pls_golite062009 |
|
Region A: Residues: [113-453] |
1 11 21 31 41 51
| | | | | |
1 LTDQELKHLI LEAANGFLFV VCCQTGKVLY VADSITPVLN LKQEDWLQRN LNELIHPDDQ 60
61 DKIRDQLCGS EVSVNKVLDL KSGSVKREGA STRVHMSCRR GFICRMRVGA LEPLHRLRNR 120
121 RPLFQHAGQN YVVMHCTGYI KNAPPQGINA PASSCLVAIA RLQVASMPVC ADPTSTNQFS 180
181 VRVSEDGKMT FIDARVSDLI GLSSDQLIGR YWWNLAHPAD EKTLQDSFVA LLSDQPMRIN 240
241 IRVRTSTDYI PCTVSAYKFM NPYSEQFEYV VATHQIAPQE DINNWVTAPT VPQPQASEFG 300
301 ELGGAPSAVD YGQSSSGGWR PEAQGAPQAQ WQWDPMNGYN Q
|
| Detection Method: | |
| Confidence: | 26.69897 |
| Match: | 1wa9A |
| Description: | Crystal Structure of the PAS repeat region of the Drosophila clock protein PERIOD |
Matching Structure (courtesy of the PDB): |
|
