| Protein: | krs-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 572 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for krs-1.
| Description | E-value | Query Range |
Subject Range |
|
|
555.0 | [0..1] | [572..1] |
|
Region A: Residues: [1-572] |
1 11 21 31 41 51
| | | | | |
1 MSEPEAKLSK NEQKRLAKQA KKEQERLEKD AAKLNVAVAD APKVVREADP SDPQEYFNMR 60
61 VRMIEARRAA GDNPFPHKFN VTISLTDFIT KYTPLEKEQV VEEIVSVAGR IHSKRESGSK 120
121 LVFYDIHGEG THIQIMANAK FHTGDVDFVT LHDRIKRGDI VGFTGRATRT KAGELSLIPN 180
181 EILQLTPCLH MLPHSHFGLK DKELRFRKRY LDLILNPRVK DNFVIRSKII TFLRRYLDNL 240
241 GFLEVETPIM NQIAGGATAK PFITHHNDLD MNLFLRVAPE LYHKMLVVGG IDRVYEVGRL 300
301 FRNEGIDLTH NPEFTTCEFY MAYADYEDVI QLTEDLLSSM VMSIKGTYKI EYHPNGPNTE 360
361 PVYEVDFTPP FKRVHMYDGL AEKLGATLPD PSTLHTEEAR EVFDKLCRDN NVDCSAPRTT 420
421 ARLLDKLVGE YLESTFISPT FLIGHPQIMS PLAKWHRSIP GLTERFELFA VTREIANAYT 480
481 ELNDPITQRQ RFEQQAKDKD AGDDEAQMID ETFCNALEYG LPPTGGWGMG IDRLSMILTD 540
541 NNNIKEVLLF PAMRPEDGTE KKTDFDAPTT LA
|
| Detection Method: |  |
| Confidence: | 142.0 |
| Match: | 1e1oA |
| Description: | Lysyl-tRNA synthetase (LysRS) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| lysine-tRNA ligase activity | 11.0047124677093 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 7.89468709683036 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 7.89468709683036 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 7.88410036819636 | bayes_pls_golite062009 |
| ligase activity | 6.92073480193262 | bayes_pls_golite062009 |
| asparagine-tRNA ligase activity | 5.29805946490109 | bayes_pls_golite062009 |
| aspartate-tRNA ligase activity | 3.80084837437429 | bayes_pls_golite062009 |
| phenylalanine-tRNA ligase activity | 3.4145644216516 | bayes_pls_golite062009 |
| structural constituent of ribosome | 2.90150581291897 | bayes_pls_golite062009 |
| glycine-tRNA ligase activity | 2.61548498770105 | bayes_pls_golite062009 |
| structural molecule activity | 2.54582212334303 | bayes_pls_golite062009 |
| proline-tRNA ligase activity | 2.52223115725965 | bayes_pls_golite062009 |
| serine-tRNA ligase activity | 2.46505535069103 | bayes_pls_golite062009 |
| threonine-tRNA ligase activity | 2.18642354927 | bayes_pls_golite062009 |
| catalytic activity | 1.99372273395202 | bayes_pls_golite062009 |
| alanine-tRNA ligase activity | 1.82594054955281 | bayes_pls_golite062009 |
| histidine-tRNA ligase activity | 1.72215103383322 | bayes_pls_golite062009 |
| transcription regulator activity | 1.67362693618722 | bayes_pls_golite062009 |
| binding | 1.54403712698597 | bayes_pls_golite062009 |
| nucleic acid binding | 1.48056625237411 | bayes_pls_golite062009 |
| DNA binding | 1.44496421928708 | bayes_pls_golite062009 |
| translation initiation factor activity | 1.27539679024898 | bayes_pls_golite062009 |
| transcription factor activity | 0.825973629967327 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.77755643935497 | bayes_pls_golite062009 |
| ribonuclease activity | 0.702449673647117 | bayes_pls_golite062009 |
| nuclease activity | 0.29926900436997 | bayes_pls_golite062009 |
