| Protein: | rav1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 1297 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rav1.
| Description | E-value | Query Range |
Subject Range |
|
|
919.0 | [0..2] | [1262..50] |
|
|
885.0 | [0..3] | [1246..1] |
|
|
884.0 | [0..7] | [1282..6] |
|
|
866.0 | [0..3] | [1250..1138] |
|
|
864.0 | [0..3] | [1233..1] |
|
|
863.0 | [0..3] | [1233..1] |
|
|
854.0 | [0..22] | [1266..35] |
|
|
853.0 | [0..28] | [1266..2] |
|
|
809.0 | [0..83] | [1262..2] |
|
|
803.0 | [0..3] | [1275..1] |
|
Region A: Residues: [1-732] |
1 11 21 31 41 51
| | | | | |
1 MPLAFTNPGT PLKRTAAYDN VQWNQNRILT FGTRYTVLII VNNYESYQNI QFGESIGAVA 60
61 LDQRTGFLAI AHGQVLDIYK PADSLKWTHH YNYITQLSED ITQLSWGYNF DLLLCASSYT 120
121 KLINFSEDKP RLVWSQNRIS DSFLSSTISS DACFIASIET KNPLAKVWQR TSPQGTVSSC 180
181 DDFSYLVHPC RVRFSQWSKH LHPDASGSTP FLSTVGYDNV LRIWQVGSRF GSQLMHLSCF 240
241 LNLRKYYKSD QPPYCCFIDK DDFTIALAHA ISRHSGQVHK DRILNRLLAL ASGQPHIFLL 300
301 FTFECLYIFS LVIDQETLSS FELINQVPTN FPKGALQPDG FIPIYRTSKH EFYDYNIILF 360
361 FQNSAREYMF SLTDFFYSDF ELRVSYDFYG HDYPIKSLTR TSNGHGIVSR DVNRICMFQS 420
421 YISQDGKNQL ICRFRLLLGE SDFILPLYAG EYAAVLNLNS LKLWHCNEAI PPTLLCTCRQ 480
481 VPTSPIITFF ILPVQNNDNS ALCALTEGGH AWFWSVSNEA HDGSAVLRFI DRVNFTKNLN 540
541 IASAVDVMGW SSTLNLSSLS SFDQEVFQSI SKDGLLQTWM ARVLGDDKAE ISEISKVQTS 600
601 IKSATMIKGS TSKKVAVVSE NNRRLSIFDT RSSEFSEKEE FSSVFDDYGP INDLDWTSTP 660
661 NSHSILAVGF LHDVILLCQN RRSYMNDIPC WSRIRRYNLL EYTNSLISDS SWLDNGTLVT 720
721 AIGNGLFYFD NS
|
| Detection Method: |  |
| Confidence: | 27.522879 |
| Match: | 1pguA |
| Description: | Actin interacting protein 1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.42570478946173 | bayes_pls_golite062009 |
| protein binding | 1.21879977456466 | bayes_pls_golite062009 |
| transporter activity | 1.21549336905926 | bayes_pls_golite062009 |
| transcription regulator activity | 0.579815310385678 | bayes_pls_golite062009 |
| nucleic acid binding | 0.570141050045461 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.479978536094414 | bayes_pls_golite062009 |
| 0.45054027253231 | bayes_pls_golite062009 | |
| DNA binding | 0.0736878329528894 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.00585398682921312 | bayes_pls_golite062009 |
|
Region A: Residues: [733-951] |
1 11 21 31 41 51
| | | | | |
1 LPEDQSLLFP ASLKRSAKNI FDLAYQLNGI LPVFHPQLLQ QLLLRNQPFL FTNILLRFYL 60
61 CLKDDVDMHF LLNMDCSEFY CCDEEISKDL LIKSLSQNSA EILNPAELDF EETSVSKHLG 120
121 LYIDEMIKKL TALLKVKKVK TLTRSSQFLL LNLIEAFNKA RALRDSLDLN GKRYCIMLNQ 180
181 YVLSKHQRQL TSLPTREMAW AFHSSNKAVL LDHTKKLHG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [952-1223] |
1 11 21 31 41 51
| | | | | |
1 KPLLWNAVEE YAIPFWLNEQ LLKDVFLELS RNHYAEIDDR NPENVSLYHI ALHKINVFRD 60
61 LWRLASWHKE SARTVKLLSN DFSKKKWKVV ASKNAFALLS KHRYFYASAF FLLADSCYDA 120
121 AKVCIRNLKS ISLAIAMTRV YEGDDGPTLK RLINEYVLPL AVSQNDRWLT NWSFTILKQE 180
181 KKALQSLVSP IRSLVSDNDF IQLYTSDKND QEIHENKDSQ RNSTNEPVRN KFPSDDPAFI 240
241 LLYECLRSSN VQIDESLEYR FVLHNANVYC QL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1224-1297] |
1 11 21 31 41 51
| | | | | |
1 GCDLIALGLL RNWKFQKNPA TAHLETEDYM VTDKQSAVEK THDSPKLGKT LMGQDIRPTP 60
61 DDVPEFNESA FSFE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
