| Protein: | SPBC36B7.05c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 279 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC36B7.05c.
| Description | E-value | Query Range |
Subject Range |
|
|
105.0 | [0..37] | [279..58] |
|
|
104.0 | [0..37] | [279..72] |
|
|
103.0 | [0..37] | [279..64] |
|
|
103.0 | [0..37] | [279..63] |
|
|
102.0 | [0..37] | [279..63] |
|
|
102.0 | [0..37] | [279..68] |
|
|
102.0 | [0..37] | [279..68] |
|
|
101.0 | [0..37] | [279..61] |
|
|
101.0 | [0..37] | [279..42] |
|
|
101.0 | [0..37] | [279..99] |
|
Region A: Residues: [1-75] |
1 11 21 31 41 51
| | | | | |
1 MDEDETTYPE ALRRLLIETP AAIWQLDDES AQCNNCGGPF TWFRRRHHCR WCGKLFCYNC 60
61 CNSFAKLPVS SVSVD
|
| Detection Method: |  |
| Confidence: | 3.522879 |
| Match: | 1z2qA |
| Description: | High-resolution solution structure of the LM5-1 FYVE domain from Leishmania major |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [76-151] |
1 11 21 31 41 51
| | | | | |
1 PTEDLIPQDM FIRDPDFLAN DNDDDNDSQD SSWINVRVCV NCRQQLSELK ELDLPYPITT 60
61 CLNDDTTTRS NNQVIQ
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [152-279] |
1 11 21 31 41 51
| | | | | |
1 SSCGNNLQRI EEPDDFVECP VCYAPLSSFK TLSERESHVA NCLSNNSSSP RNMTEFLKHA 60
61 RRYISMQLSE TSPCLGQECI ICFEEFAAGD RVARIEYCLC IFHLKCYRDW LSTGAAGCPV 120
121 HAATLHLS
|
| Detection Method: | |
| Confidence: | 4.09691 |
| Match: | 1rmdA |
| Description: | RAG1 DIMERIZATION DOMAIN |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ubiquitin-protein ligase activity | 5.65442784325159 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 5.55686022186257 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 4.59153177011595 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 2.57382484274962 | bayes_pls_golite062009 |
| binding | 2.19426901055464 | bayes_pls_golite062009 |
| protein binding | 1.73461977726143 | bayes_pls_golite062009 |
| small conjugating protein-specific protease activity | 1.2126425713931 | bayes_pls_golite062009 |
| ubiquitin-specific protease activity | 1.03469202541773 | bayes_pls_golite062009 |
| nucleic acid binding | 0.708499177773075 | bayes_pls_golite062009 |
| ligase activity | 0.63517530468004 | bayes_pls_golite062009 |
| transcription regulator activity | 0.553991532499653 | bayes_pls_golite062009 |
| cysteine-type peptidase activity | 0.50197530717959 | bayes_pls_golite062009 |
| ubiquitin thiolesterase activity | 0.265769062717221 | bayes_pls_golite062009 |
| DNA binding | 0.227671243150662 | bayes_pls_golite062009 |
| catalytic activity | 0.14112008370434 | bayes_pls_golite062009 |
| hydrolase activity | 0.0941589668589109 | bayes_pls_golite062009 |
