| Protein: | SPBC83.05 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 773 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC83.05.
| Description | E-value | Query Range |
Subject Range |
|
|
772.0 | [0..13] | [771..39] |
|
|
767.0 | [0..23] | [770..30] |
|
|
755.0 | [0..37] | [771..92] |
|
|
737.0 | [0..30] | [769..40] |
|
|
722.0 | [0..11] | [771..8] |
|
|
703.0 | [0..24] | [767..51] |
|
|
692.0 | [0..37] | [771..83] |
|
|
692.0 | [0..28] | [771..50] |
|
|
682.0 | [0..28] | [772..32] |
|
|
676.0 | [0..28] | [769..80] |
|
Region A: Residues: [1-336] |
1 11 21 31 41 51
| | | | | |
1 MNLFLSRFTG LRNTSFLGHA RPFMFPRRYA HSLVAHNIGH IKLDPNEGLF FVDNLVNTPT 60
61 YFYIQRYTAL LFQNNLKKQL SAAFPSSDTM QLEDIIFRWQ DGGAFLKVRY KEFPQDTEAV 120
121 SEHVRESFRK RPVRTILHPF STPIPHMVHG IPWLQDLYIF PSRTVDVNFE GPPLSQERLY 180
181 SIFRTYGKLR SVTINSPTSA TLSFSSLRSA TSALNCMHGF VYGKTEFHMR YRHMNRFVAF 240
241 KDWLFSHPRF TIPLVAAAIT VLTASLFDPI RKFFVETNIV HGQKLRNINV VGWVKKKTRD 300
301 IVLSPFHENG TNIKAPIWTT REKDCEQLKE WLDEAL
|
| Detection Method: |  |
| Confidence: | 19.39794 |
| Match: | 2ghpA |
| Description: | No description for 2ghpA was found. |
| Term | Confidence | Notes |
| binding | 3.06679562635705 | bayes_pls_golite062009 |
| nucleic acid binding | 1.76055303585115 | bayes_pls_golite062009 |
| protein binding | 1.32954276279597 | bayes_pls_golite062009 |
| RNA binding | 1.18157050902203 | bayes_pls_golite062009 |
| mRNA binding | 0.487879052146416 | bayes_pls_golite062009 |
|
Region A: Residues: [337-679] |
1 11 21 31 41 51
| | | | | |
1 HSFIVVQGPR GSGKRDLVDR VVKERKNVLF FDCDRLFSTT NTEMFVSTLA SQTGYFPLFS 60
61 FLNNISSLID MAAQGLIGQK TGIVSSSEGQ VRQILNTTQT VLRSLALREH KEADTSVLDE 120
121 SEFLEVHADR LPVVILDNFQ LRKLSNPMQR VVAEWAGNLV KEGIAHVLML TPDVGGTKSL 180
181 EQYVNGWENR TLLLGDADPV LAQRYVIESL PEEMQTEELR KELRVQLPKI GGRLRDLDYV 240
241 ARRLRVNSSS VSEAIGGIVS QNASDILQTF LRPASLTSEE KPTFTPEESW TLITYLSQHE 300
301 YIPYHMLMLD PLFKGHDDAV RALEESELIT ITTVNARPDK VYA
|
| Detection Method: | |
| Confidence: | 1.01 |
| Match: | 2fnaA |
| Description: | Crystal structure of (13814777) from SULFOLOBUS SOLFATARICUS at 2.00 A resolution |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.00435458244286 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 1.60867879098268 | bayes_pls_golite062009 |
| pyrophosphatase activity | 1.54036876924203 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 1.5218662658682 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 1.51917437681292 | bayes_pls_golite062009 |
| hydrolase activity | 0.637958076892156 | bayes_pls_golite062009 |
| protein binding | 0.409258528033042 | bayes_pls_golite062009 |
| catalytic activity | 0.400036839701206 | bayes_pls_golite062009 |
| motor activity | 0.294261683163235 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.15435325982346 | bayes_pls_golite062009 |
| nucleotide binding | 0.153440379095025 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.130523976113733 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.130518519278213 | bayes_pls_golite062009 |
|
Region A: Residues: [680-773] |
1 11 21 31 41 51
| | | | | |
1 GKPVYVTAFR QLVNDPVLSA NMQLVRCNAL IGMANNAIKN DEQELQMLKD LGNLESGVKD 60
61 RAHYLTTRIQ KNQGVITDNE KSIERLTEAL KKID
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.888 | 0.038 | mitochondrial genome maintenance | a.24.14 | FAT domain of focal adhesion kinase |
