| Protein: | SPBC1604.09c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 260 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC1604.09c.
| Description | E-value | Query Range |
Subject Range |
|
|
215.0 | [0..9] | [259..309] |
|
|
209.0 | [0..11] | [260..343] |
|
|
209.0 | [0..9] | [255..345] |
|
|
209.0 | [0..9] | [254..349] |
|
|
207.0 | [0..9] | [257..305] |
|
|
207.0 | [0..9] | [255..338] |
|
|
205.0 | [0..9] | [257..350] |
|
|
205.0 | [0..9] | [259..345] |
|
|
204.0 | [0..11] | [260..343] |
|
|
204.0 | [0..11] | [260..344] |
|
Region A: Residues: [1-89] |
1 11 21 31 41 51
| | | | | |
1 MSSSNWEKLK KKLDSAKSGR VEKKHSNEKK YLKSVKGKNN ENENSYIVDK KRMNELKKFA 60
61 KENDIPESQV LDAYGVDASK LTRKTNLET
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.319 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.469 | a.74.1 | Cyclin-like |
| View | Download | 0.375 | a.74.1 | Cyclin-like |
| View | Download | 0.374 | a.74.1 | Cyclin-like |
| View | Download | 0.327 | a.74.1 | Cyclin-like |
|
Region A: Residues: [90-260] |
1 11 21 31 41 51
| | | | | |
1 LGKYIAMDCE MVGVADDMSV LARVSIVNYH GHVVYDTYVR PKEKVTDWRT WVSGVKSFHM 60
61 RDAPSFEKVQ AEVAKILDNR VLVGHAVHND LKVLLLSHPR RMIRDTSRFS GYRKLAKGRT 120
121 PGLKKLAEVI LGRDIQSGQH SSVQDAQATM ELYKKVKKEM DEVAFKGLSK S
|
| Detection Method: | |
| Confidence: | 31.30103 |
| Match: | 1wljA |
| Description: | human ISG20 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ribonuclease activity | 5.30591758406946 | bayes_pls_golite062009 |
| exoribonuclease activity | 3.71639182685131 | bayes_pls_golite062009 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 3.59362615133405 | bayes_pls_golite062009 |
| exonuclease activity | 3.13676176369406 | bayes_pls_golite062009 |
| nuclease activity | 3.11657409772275 | bayes_pls_golite062009 |
| ribonuclease H activity | 2.91966688044755 | bayes_pls_golite062009 |
| single-stranded DNA specific 3'-5' exodeoxyribonuclease activity | 2.75003136922541 | bayes_pls_golite062009 |
| endonuclease activity | 2.63074055051349 | bayes_pls_golite062009 |
| endoribonuclease activity | 2.59247838057313 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 2.57498413015114 | bayes_pls_golite062009 |
| hydrolase activity | 2.41899414621161 | bayes_pls_golite062009 |
| 3'-5'-exoribonuclease activity | 2.12039058720352 | bayes_pls_golite062009 |
| exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 2.04408785855894 | bayes_pls_golite062009 |
| 2.02108278477989 | bayes_pls_golite062009 | |
| endoribonuclease activity, producing 5'-phosphomonoesters | 1.74431545836806 | bayes_pls_golite062009 |
| endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 1.59628511603826 | bayes_pls_golite062009 |
| 3'-5' exonuclease activity | 1.44123900197846 | bayes_pls_golite062009 |
| catalytic activity | 1.25233849524628 | bayes_pls_golite062009 |
| protein binding | 1.16870279238939 | bayes_pls_golite062009 |
| deoxyribonuclease activity | 1.1219517187744 | bayes_pls_golite062009 |
| transcription regulator activity | 1.10433412699603 | bayes_pls_golite062009 |
| nucleic acid binding | 1.04079362397031 | bayes_pls_golite062009 |
| DNA binding | 0.860359347662869 | bayes_pls_golite062009 |
| binding | 0.762139256580538 | bayes_pls_golite062009 |
| RNA binding | 0.750194803368593 | bayes_pls_golite062009 |
| DNA polymerase activity | 0.717600245625866 | bayes_pls_golite062009 |
| DNA-directed DNA polymerase activity | 0.568273228950698 | bayes_pls_golite062009 |
| transcription factor activity | 0.332903382446869 | bayes_pls_golite062009 |
| exodeoxyribonuclease activity | 0.278838342302102 | bayes_pls_golite062009 |
| exodeoxyribonuclease activity, producing 5'-phosphomonoesters | 0.261428436029202 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.0701825322473915 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.00214157813118243 | bayes_pls_golite062009 |
