YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: SPAC222.13c
Organism: Schizosaccharomyces pombe
Length: 592 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC222.13c.

Description E-value Query
Range
Subject
Range
gi|74007456 - gi|74007456|ref|XP_549023.2| PREDICTED: similar to 6-phosphofructo-2-kinase/fructose-2,6-biphosphata...
557.0 [0..87] [590..108]
gi|38488706, gi|... - gi|38488706|ref|NP_942111.1| 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4, like [Danio reri...
557.0 [0..102] [590..5]
PFKFB1 - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1
555.0 [0..105] [590..1]
gi|109130898 - gi|109130898|ref|XP_001091907.1| PREDICTED: 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 is...
553.0 [0..105] [590..1]
F264_RAT - 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 4 OS=Rattus norvegicus GN=Pfkfb4 PE=1 SV=3
553.0 [0..102] [590..5]
gi|61368989 - gi|61368989|gb|AAX43268.1| 6-phosphofructo-2-kinase/fructose-26-biphosphatase 4 [synthetic construct...
551.0 [0..102] [590..5]
gi|119914743, gi... - gi|76649253|ref|XP_873275.1| PREDICTED: similar to 6-phosphofructo-2-kinase/fructose-2,6-biphosphata...
551.0 [0..102] [590..5]

Back

Predicted Domain #1
Region A:
Residues: [1-101]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNTGSARTE EFTKGTGYEA TKPNNDTDDD AKQNYPSKEP HMKLGDYTEE TSFVDDSIFK  60
   61 REELTPDRNS PANDVEKMEV PKPTPQWMKL KDEGKLGKHR K

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [102-592]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NRLRRPGRFP VRQESTIDIP GLTVSKRTEN DSNNASYGIR EKLIIILVGI PATGKSYIGS  60
   61 KLSRYYNWLK YNCRFFSVGD KRREEGASTY SMSADFFDIK NEETFKFREN VALETLEDLL 120
  121 HWMIHENGVI GILDATNSTH ERRKHLYDRI SKEADIGIMF LESLCTDDIL FEENIKLKIK 180
  181 GPDYEGYDTE SALKDLRERV DLYKKYYEPL DERDEQLPFL QYVKVINVGI KVVTHNIEGF 240
  241 LAGQAVYFML NLNIQKRQIW LTRPGESLDT VAGRIGGDAS LTPIGKQYAQ DLANFMDRQR 300
  301 VLWQLRYTND LASTNKRFSL SEASSFNVWS SVRKRAIETI EFFNPDSYNV KKIRLLNDLN 360
  361 LGSREGLTLR EFSEKYPDEF DVIKRKDYAY RFSGQGGESY LDVIHRLQPL IVEIERSSGN 420
  421 ILVVSHRIVS NILMTYFLNY HPEDIIDVGL PLHTLFCIES DRYGTTCMAY RYDAANRQFI 480
  481 KDPMFDLRKR T

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 154.0
Match: 1bifA
Description: 6-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE BIFUNCTIONAL ENZYME COMPLEXED WITH ATP-G-S AND PHOSPHATE
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
6-phosphofructo-2-kinase activity 5.42792629395033 bayes_pls_golite062009
fructose-2,6-bisphosphate 2-phosphatase activity 5.3758259177501 bayes_pls_golite062009
phosphofructokinase activity 4.74681837647377 bayes_pls_golite062009
phosphoglycerate mutase activity 3.38777226675734 bayes_pls_golite062009
fructose binding 2.65431677206223 bayes_pls_golite062009
fructose-6-phosphate binding 2.61827203165744 bayes_pls_golite062009
phosphatase activity 2.20711859657073 bayes_pls_golite062009
phosphoric ester hydrolase activity 2.0220580269993 bayes_pls_golite062009
carbohydrate kinase activity 1.86382423322759 bayes_pls_golite062009
nucleic acid binding 1.84541587592638 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 1.78167518994202 bayes_pls_golite062009
kinase activity 1.67050219347378 bayes_pls_golite062009
carbohydrate phosphatase activity 1.56016941506609 bayes_pls_golite062009
binding 1.50412762608586 bayes_pls_golite062009
DNA binding 1.48341220422804 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.3848751235482 bayes_pls_golite062009
catalytic activity 1.37714494241232 bayes_pls_golite062009
hydrolase activity 1.32674664996211 bayes_pls_golite062009
transcription regulator activity 1.30136714640988 bayes_pls_golite062009
hydrogen ion transporting ATP synthase activity, rotational mechanism 1.24295845488314 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 1.08151102259045 bayes_pls_golite062009
intramolecular transferase activity, phosphotransferases 0.916759493094631 bayes_pls_golite062009
structural constituent of ribosome 0.867181425037322 bayes_pls_golite062009
DNA-dependent ATPase activity 0.75383985982414 bayes_pls_golite062009
transferase activity 0.709223678750312 bayes_pls_golite062009
hydrogen ion transmembrane transporter activity 0.688993364310212 bayes_pls_golite062009
guanyl nucleotide binding 0.656009904481476 bayes_pls_golite062009
guanyl ribonucleotide binding 0.64416740142962 bayes_pls_golite062009
GTP binding 0.643084645864898 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 0.561773791863863 bayes_pls_golite062009
GTPase activity 0.406399103964327 bayes_pls_golite062009
protein kinase activity 0.351308564667977 bayes_pls_golite062009
transcription factor activity 0.341088753451767 bayes_pls_golite062009
isomerase activity 0.275500708652009 bayes_pls_golite062009
protein binding 0.236742803345453 bayes_pls_golite062009
structure-specific DNA binding 0.229327589367146 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 0.141310691160109 bayes_pls_golite062009
ion transmembrane transporter activity 0.0935614991493088 bayes_pls_golite062009
cation transmembrane transporter activity 0.0137537621821964 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle