| Protein: | SPBC1A4.07c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 436 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC1A4.07c.
| Description | E-value | Query Range |
Subject Range |
|
|
429.0 | [0..2] | [435..1281] |
|
|
409.0 | [0..2] | [435..1153] |
|
|
406.0 | [0..2] | [436..1057] |
|
|
398.0 | [0..2] | [435..632] |
|
|
390.0 | [0..8] | [435..830] |
|
Region A: Residues: [1-436] |
1 11 21 31 41 51
| | | | | |
1 MKVKTITRGT SLTRLNDQDP VKRNLDPSLH PFERAREYTR ALNATKMDRM FAAPFLGQLG 60
61 RGHQDGVYSL ARDTKTLIDC ASGSGDGAVK LWDASERCER WTSKAHEGIV RGLVFSNQGD 120
121 VLSCASDRYV YMLNKQDGKV KRSYLGDSSL LDIDTSKGGD LFATSGENVS IWDYSRDTPV 180
181 TKFEWGADTL PVVKFNYTET SVLASAGMDR SIVIYDLRTS SPLTKLITKL RTNSISWNPM 240
241 EAFNFVAGSE DHNLYMYDMR NLKRALHVYK DHVSAVMSVD FSPTGQEFVS GSYDKTIRIY 300
301 NVREGHSRDV YHTKRMQRVT AVKFSMDAQY IFSGSDDSNV RLWRARASSR ASIRSTREEN 360
361 RLKYLDSLRE RYKHIPEIRR IARHRHLPTN VKKAAEIKRE EINSLKRREE NIRRHSKKGA 420
421 VPYEKERERH VVGIQK
|
| Detection Method: |  |
| Confidence: | 39.30103 |
| Match: | 1nr0A |
| Description: | Actin interacting protein 1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| snoRNA binding | 6.03079504484743 | bayes_pls_golite062009 |
| 5.51602917776723 | bayes_pls_golite062009 | |
| histone methyltransferase activity (H3-K4 specific) | 4.71992275913384 | bayes_pls_golite062009 |
| S-adenosylmethionine-dependent methyltransferase activity | 3.25521258308263 | bayes_pls_golite062009 |
| GTPase activity | 3.23750443966606 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 3.1056443224755 | bayes_pls_golite062009 |
| RNA binding | 3.0829625416797 | bayes_pls_golite062009 |
| tubulin binding | 2.76945430061825 | bayes_pls_golite062009 |
| microtubule binding | 2.72684103222924 | bayes_pls_golite062009 |
| binding | 2.42570478946173 | bayes_pls_golite062009 |
| actin binding | 2.27900251096697 | bayes_pls_golite062009 |
| histone methyltransferase activity | 1.85632145559025 | bayes_pls_golite062009 |
| dynein binding | 1.73730057055973 | bayes_pls_golite062009 |
| structural molecule activity | 1.47097979074281 | bayes_pls_golite062009 |
| protein methyltransferase activity | 1.35170368882651 | bayes_pls_golite062009 |
| transcription regulator activity | 1.25687092973217 | bayes_pls_golite062009 |
| protein binding | 1.21879977456466 | bayes_pls_golite062009 |
| transporter activity | 1.21549336905926 | bayes_pls_golite062009 |
| nucleic acid binding | 1.20712373307552 | bayes_pls_golite062009 |
| protein-lysine N-methyltransferase activity | 1.15313682561559 | bayes_pls_golite062009 |
| histone-lysine N-methyltransferase activity | 1.15313682561559 | bayes_pls_golite062009 |
| lysine N-methyltransferase activity | 1.15313682561559 | bayes_pls_golite062009 |
| receptor activity | 1.12819778129653 | bayes_pls_golite062009 |
| G-protein-coupled receptor binding | 1.11754260203517 | bayes_pls_golite062009 |
| molecular transducer activity | 0.974380908248463 | bayes_pls_golite062009 |
| signal transducer activity | 0.974380908248463 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.734793983890004 | bayes_pls_golite062009 |
| DNA binding | 0.711274653406079 | bayes_pls_golite062009 |
| transcription repressor activity | 0.702111212042669 | bayes_pls_golite062009 |
| histone binding | 0.685319917508843 | bayes_pls_golite062009 |
| actin filament binding | 0.554537899540618 | bayes_pls_golite062009 |
| dynactin binding | 0.537498869132781 | bayes_pls_golite062009 |
| receptor binding | 0.316169754698691 | bayes_pls_golite062009 |
| transcription factor activity | 0.243992994917491 | bayes_pls_golite062009 |
| protein kinase activity | 0.229242350006544 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.157016319695991 | bayes_pls_golite062009 |
| chromatin binding | 0.145491963066342 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.118975415284669 | bayes_pls_golite062009 |
| kinase activity | 0.08280915441667 | bayes_pls_golite062009 |
| mRNA binding | 0.0519838181830878 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.00585398682921312 | bayes_pls_golite062009 |
| N-methyltransferase activity | 0.00335766408304172 | bayes_pls_golite062009 |
