| Protein: | pku70 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 607 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pku70.
| Description | E-value | Query Range |
Subject Range |
|
|
581.0 | [0..9] | [605..27] |
|
|
567.0 | [0..9] | [605..27] |
|
|
565.0 | [0..9] | [605..27] |
|
|
562.0 | [0..7] | [606..23] |
|
|
559.0 | [0..7] | [606..23] |
|
Region A: Residues: [1-607] |
1 11 21 31 41 51
| | | | | |
1 MENDEQIDET ENFAIGKYAI LFVIEVSPSM LDPVDEFTPS SLQMALICAY QLAAQRVITN 60
61 PSDIMGVLLY GTESSTGRFA NQMMLLDIDP PDAERIKSLQ SFEKDFQFSK EKFKPCSCQV 120
121 SLSSVLYHCS VIFTTKAENF EKRLFLITDN DHPAWDATER DIILQRAKDL RDLDIQVHPV 180
181 FLDPPTHSFR INIFYSDFLY IVYGRQDVSN LVNRGQAQLQ HMLNMITALQ KPKRAHFHLK 240
241 MDLGNDVRIG VEAFILLKRL ESAKTNWVYA KGERFAVAVP QSKQVSFATK KELKKDEIRR 300
301 SYSYGGSSVV FGSDELNKVR SFEPPTLRII GFRDFSTLKP WHCLKPAVFL RPKDDEIIGS 360
361 GAVFSAIHKK LLASNKIGIA WFVSRPNANP CFVAMLATPG SIHIRDDFEL PLGIFLVQLP 420
421 TADDIRSLPP INPNPISMPS NLIETMQRIL RGMELRSYQP GKYNNPSLQW HYKVLQALAL 480
481 DEEIPTDFVD NTLPKYKAIQ KRVGEYMGDV NNIVAEYRND ISDKNGIKEE EEDQGPIVKK 540
541 ARIEKSGKPI FAEDDRLKQL YIEGVLDKEI KALKVSQLKD ILRDRGLRVS GKKADLLDNL 600
601 TNYVKKL
|
| Detection Method: |  |
| Confidence: | 161.0 |
| Match: | 1jeqA |
| Description: | DNA binding C-terminal domain of ku70; Ku70 subunit |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| double-stranded telomeric DNA binding | 8.64621483095491 | bayes_pls_golite062009 |
| telomeric DNA binding | 5.16364366157397 | bayes_pls_golite062009 |
| transcription regulator activity | 3.05720838352689 | bayes_pls_golite062009 |
| promoter binding | 3.01492777192913 | bayes_pls_golite062009 |
| transcription activator activity | 2.87080577911324 | bayes_pls_golite062009 |
| binding | 2.75824485094584 | bayes_pls_golite062009 |
| protein binding | 2.58357303743968 | bayes_pls_golite062009 |
| nucleic acid binding | 2.08531850924748 | bayes_pls_golite062009 |
| DNA binding | 1.91667917801679 | bayes_pls_golite062009 |
| transcription factor activity | 1.37299910766941 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 0.985753648509262 | bayes_pls_golite062009 |
| protein complex binding | 0.94234534987624 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.914051610867509 | bayes_pls_golite062009 |
| single-stranded DNA binding | 0.814975395718076 | bayes_pls_golite062009 |
| protein dimerization activity | 0.73404855126602 | bayes_pls_golite062009 |
| DNA helicase activity | 0.720743494912414 | bayes_pls_golite062009 |
| protein heterodimerization activity | 0.64812784969409 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 0.506640285146188 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.450760554291027 | bayes_pls_golite062009 |
| structural molecule activity | 0.375125487765613 | bayes_pls_golite062009 |
| receptor binding | 0.234020194580985 | bayes_pls_golite062009 |
| transcription factor binding | 0.184852480703492 | bayes_pls_golite062009 |
| protein C-terminus binding | 0.15516806759612 | bayes_pls_golite062009 |
| identical protein binding | 0.125363466534611 | bayes_pls_golite062009 |
| collagen binding | 0.113837148027681 | bayes_pls_golite062009 |
| transcription repressor activity | 0.0660601071978013 | bayes_pls_golite062009 |
