| Protein: | cyp9 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 610 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cyp9.
| Description | E-value | Query Range |
Subject Range |
|
|
343.0 | [0..3] | [431..1171] |
|
|
341.0 | [0..3] | [433..736] |
|
|
340.0 | [0..3] | [408..1085] |
|
|
338.0 | [0..3] | [403..647] |
|
|
336.0 | [0..1] | [408..155] |
|
|
333.0 | [0..3] | [486..882] |
|
|
329.0 | [0..10] | [400..1122] |
|
Region A: Residues: [1-351] |
1 11 21 31 41 51
| | | | | |
1 MMDGASPVDR DVSPVGLPKK RIKQNHDQVF LHNLPDAPRY TKSYMHNAEI YKCFPTKSNY 60
61 ILSVSYDGYV KFWHKTPNGV EYIKEFHAHN AMLLSAELSQ DERLFITGAD DKSLKVFDVE 120
121 SIDLVNIIDL EFLPKAICCF NSPSLKTSLI AVSSAESPLI FFFESGGDGE VLYTVKKHTA 180
181 PVHCLRYLST LDCFLSIDIG GMVEYWSPEE PFQKPDTAEL FNMKSQTDLY IFKKQKSVPT 240
241 SLEVSHFENF WSTISYPDCK VRVFDTKSGR AILELDENPS NAAKKVEALF EKEDTESSYY 300
301 MSHVELGRRI AIERDIEKHG LTVGTTAIFD ESEKYLLYGS IVGIKVVSID N
|
| Detection Method: |  |
| Confidence: | 50.0 |
| Match: | 2ovpB |
| Description: | No description for 2ovpB was found. |
|
Region A: Residues: [352-408] |
1 11 21 31 41 51
| | | | | |
1 GTVVRIYGKD EAVRFTRLSL YQQAPKKSNL PSLDVIASNN PLVEESFQKD PTLFATA
|
| Detection Method: | |
| Confidence: | 21.221849 |
| Match: | 1pguA |
| Description: | Actin interacting protein 1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [409-610] |
1 11 21 31 41 51
| | | | | |
1 WKKQRFYLFS NMSTKFTLSD RDVYNEQVLP VTNNEGRQEN GNILLGKAAI IHTTQGDISI 60
61 KLYPEEAPKA VQNFTTHAEN GYYDNTIFHR IIKNFMIQGG DPLGDGTGGE SIWKKDFEDE 120
121 ISPNLKHDRP FTVSMANSGP NTNGSQFFIT TDLTPWLDGK HTIFARAYAG LDVVHRIEQG 180
181 ETDKYDRPLE PTKIINISIV YT
|
| Detection Method: | |
| Confidence: | 30.09691 |
| Match: | 1xwnA |
| Description: | solution structure of cyclophilin like 1(PPIL1) and insights into its interaction with SKIP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidyl-prolyl cis-trans isomerase activity | 3.73853378771688 | bayes_pls_golite062009 |
| cis-trans isomerase activity | 3.66963215732405 | bayes_pls_golite062009 |
| RNA binding | 2.94609837984526 | bayes_pls_golite062009 |
| nucleic acid binding | 2.0418369369681 | bayes_pls_golite062009 |
| isomerase activity | 1.96529188741504 | bayes_pls_golite062009 |
| binding | 1.65866393331484 | bayes_pls_golite062009 |
| mRNA binding | 1.45537055700871 | bayes_pls_golite062009 |
| unfolded protein binding | 1.38124355054041 | bayes_pls_golite062009 |
| catalytic activity | 0.748655649755714 | bayes_pls_golite062009 |
| protein deacetylase activity | 0.546970732080881 | bayes_pls_golite062009 |
| histone deacetylase activity | 0.506677106948149 | bayes_pls_golite062009 |
| hydrolase activity | 0.363074952403273 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 0.350192178539189 | bayes_pls_golite062009 |
| histone binding | 0.268719695649015 | bayes_pls_golite062009 |
| protein binding | 0.230077752280113 | bayes_pls_golite062009 |
