| Protein: | mbx2 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 372 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mbx2.
| Description | E-value | Query Range |
Subject Range |
|
|
236.0 | [0..1] | [234..1] |
|
|
233.0 | [0..1] | [233..1] |
|
|
228.0 | [0..1] | [234..1] |
|
|
227.0 | [0..1] | [232..1] |
|
|
227.0 | [0..1] | [234..1] |
|
|
226.0 | [0..1] | [232..1] |
|
|
226.0 | [0..1] | [233..1] |
|
|
226.0 | [0..1] | [233..1] |
|
|
225.0 | [0..1] | [234..1] |
|
Region A: Residues: [1-85] |
1 11 21 31 41 51
| | | | | |
1 MGRKKISIAP ITDDRSRSVT FVKRKQGLYK KAYELAVLAD CEVAVTVIDR KGRLHVFCSS 60
61 DYQRTLQQLN TLSIYELKNR SHFSS
|
| Detection Method: |  |
| Confidence: | 29.221849 |
| Match: | 1tqeP |
| Description: | Mechanism of recruitment of class II histone deacetylases by myocyte enhancer factor-2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nucleic acid binding | 3.20423226810641 | bayes_pls_golite062009 |
| DNA binding | 3.19357863925229 | bayes_pls_golite062009 |
| binding | 3.13725722282473 | bayes_pls_golite062009 |
| transcription regulator activity | 3.13318816174147 | bayes_pls_golite062009 |
| transcription factor activity | 2.59884999361198 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.01575603719104 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.0615361674883 | bayes_pls_golite062009 |
| protein binding | 1.0452482001033 | bayes_pls_golite062009 |
| transcription activator activity | 0.69462470268703 | bayes_pls_golite062009 |
|
Region A: Residues: [86-199] |
1 11 21 31 41 51
| | | | | |
1 SPVEESSTVS PETTTGSFTP LNNKHLKSQD QPLSDSQLDT GDSPATSETT VQDYNPQVQS 60
61 YCRPEPLSSN HVRSCPPFPP TQHHHPHTRP PHHPPHPHFH NNNYPPPYCF QSPV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [200-372] |
1 11 21 31 41 51
| | | | | |
1 SPGATVPLQH HSPYPSDNGF PGHRRQTHFA PYYYPQRATS PSLKQVPTYL GTHVLQQDQS 60
61 TYDQKVLMPP ASYLSSPNQY TLKNVSPGNP ACPPFLYEHP NPQLTPEMFD VKQGSPIPPT 120
121 AYSGSSCETS QHTIANTPFL AYDRSPSLTN QEAESSFQDV ASISPHSLSD VKY
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
