| Protein: | SPAC1B3.08 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 423 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC1B3.08.
| Description | E-value | Query Range |
Subject Range |
|
|
352.0 | [0..4] | [422..2] |
|
|
350.0 | [0..4] | [422..2] |
|
|
343.0 | [0..14] | [422..11] |
|
|
341.0 | [0..4] | [422..2] |
|
|
336.0 | [0..8] | [420..1] |
|
|
334.0 | [0..8] | [420..1] |
|
Region A: Residues: [1-350] |
1 11 21 31 41 51
| | | | | |
1 MSERPLPLNV YFSTINSAVA RSNSVLLAKN LSIPWGKTLT SVLNFDIPGT YSSDDVLKLT 60
61 VERSISKNWT DIVLLHLQVL LYLVRDHDPA AAFKQQTELA QHLYREFSSG RCTGVHLPVL 120
121 FIVCKDLRFL AINAHNAMLR RKQQLKVISV DESEENEQLE ATARLINRAF TICINDRAPL 180
181 STSRKWGAYY IMGLLFKLYL RLDCVHLTNN VLRAMKVVEL PDISLFPKSH VVIFHYYLGI 240
241 VAFLNQNYKN ASAELEIAFS LCHKGYNRNL ELILSYWIPT RILVNHQLPT KNLLSKFPNL 300
301 ASVYIPLTRA LKSGNLGEFG KCLQKNETLL AKTKIYLTLE GTRDLCIRNL
|
| Detection Method: |  |
| Confidence: | 1.13 |
| Match: | 1qqeA |
| Description: | Vesicular transport protein sec17 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.0556615145105 | bayes_pls_golite062009 |
| protein binding | 1.6502679626605 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 1.37433494532207 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 1.16698845971978 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 0.782086955538979 | bayes_pls_golite062009 |
| nucleic acid binding | 0.437277381081288 | bayes_pls_golite062009 |
| transcription regulator activity | 0.198767743012145 | bayes_pls_golite062009 |
| DNA binding | 0.186035324819401 | bayes_pls_golite062009 |
| transferase activity | 0.157308242400253 | bayes_pls_golite062009 |
|
Region A: Residues: [351-423] |
1 11 21 31 41 51
| | | | | |
1 FRKTWIICGK STRLPVSVFQ IALQVAGTDL PKLHVEAILA NMISKGYMRG YISRNFETVV 60
61 LSAKDPFPKN VST
|
| Detection Method: | |
| Confidence: | 5.522879 |
| Match: | 1ufmA |
| Description: | Solution structure of the PCI domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 3.38230388954255 | bayes_pls_golite062009 |
| nucleic acid binding | 3.38144578566524 | bayes_pls_golite062009 |
| DNA binding | 3.30822066787723 | bayes_pls_golite062009 |
| binding | 2.93590311675477 | bayes_pls_golite062009 |
| transcription factor activity | 2.53517246325934 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.28622713424902 | bayes_pls_golite062009 |
| transcription activator activity | 1.08566311616647 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 1.04514547811581 | bayes_pls_golite062009 |
| transcription repressor activity | 0.95491822926452 | bayes_pls_golite062009 |
| protein binding | 0.890737236042485 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 0.804680913729793 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 0.59179664022664 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.42135864069093 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.249771970501337 | bayes_pls_golite062009 |
| transferase activity | 0.064832527337659 | bayes_pls_golite062009 |
