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View Structure Prediction Details

Protein: ppk2
Organism: Schizosaccharomyces pombe
Length: 665 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ppk2.

Description E-value Query
Range
Subject
Range
gi|182890286, gi... - gi|41152203|ref|NP_958485.1| p21-activated kinase 1 [Danio rerio], gi|28277471|gb|AAH44138.1| P21/Cd...
327.0 [0..44] [649..2]
gi|210068 - gi|210068|gb|AAA42545.1| gag:akt fusion protein [AKT8 retrovirus]
gi|538540 - gi|538540|pir||A40831 gag-akt polyprotein - AKT8 murine leukemia virus
304.0 [0..46] [663..102]
gi|4567091 - gi|4567091|gb|AAD23582.1|AF128443_1 SNF-1-like serine/threonine protein kinase [Glycine max]
303.0 [0..384] [658..16]
gi|62857006 - gi|62857006|dbj|BAD95888.1| Ser/Thr protein kinase [Lotus japonicus]
302.0 [0..387] [658..19]
gi|42539899 - gi|42539899|gb|AAS18877.1| SNF1-related protein kinase alpha subunit [Nicotiana attenuata]
302.0 [0..379] [658..10]
KIN10_ARATH - SNF1-related protein kinase catalytic subunit alpha KIN10 OS=Arabidopsis thaliana GN=KIN10 PE=1 SV=2
301.0 [0..377] [658..31]
gi|42545642, gi|... - gi|46107178|ref|XP_380648.1| hypothetical protein FG00472.1 [Gibberella zeae PH-1], gi|42545642|gb|E...
301.0 [0..11] [664..90]
gi|1076633, gi|4... - gi|496385|dbj|BAA05649.1| protein kinase [Nicotiana tabacum], pir||A56009 serine/threonine-specific ...
300.0 [0..379] [658..10]

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Predicted Domain #1
Region A:
Residues: [1-107]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSNSTFHEH HAKSHFHNNA CQSNASSSAC RASEDHLVSS FPNDSIIDLQ PSRPAPEPPK  60
   61 KKFGYYARRL SGHFLSLIHG SGNSTRSPPF HLQNQKSNGQ SEVWHSS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [108-665]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDSGSPKRLN RSRSSKEDMY RRRSLHGLPS LSRRNSKKSS TLSRSISLHL RSESAPISLP  60
   61 IHLYKSYSYN HSPSSLPTVL NSQALSSPPV PTTPDEVSTN RLSSSTSSMN CRNLVPDNFN 120
  121 ISIRPNTTNY RSSIQENSNG NRDSISPSAY DAPLLHNVDT QSIDGFVSVA SHFSSASTAE 180
  181 SLDDGHSATT IQQGDVSSYP LSRSVSTPVP MSPISISPAK PSPQSPKLSQ SAVGHPSSSI 240
  241 PAAAMHKVSY SDDLMRFVAR EKYYLQIVDC LCTQKDPLFF YTDFTKICQQ DTVGTYVARQ 300
  301 TLDKEVVVIK RFDISAVTHR RLLLEELQRL SGLSHKNLIR YNESFWYLNN IWSVFEYKDP 360
  361 STKLSALIPK YFFSELNIAS ICYEISSGLA FLHNSGIAHH NLTTECIYLT KSSCLKIGNY 420
  421 AFSSPYIERQ TNRGAVSHVP DWLIEKNYKE GFMKDVKSLG LVALEIFQGQ PNFFRKSIQS 480
  481 IQLTPNANVL VNRVRGLISQ EFKEFLLQTL QAETLQGPNI NMLLETSSFL EKRQTLNFEI 540
  541 CLNNLNLRER KASRYSYL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 75.30103
Match: 2h8hA
Description: No description for 2h8hA was found.

Predicted functions:

Term Confidence Notes
phosphotransferase activity, alcohol group as acceptor 5.49988294224815 bayes_pls_golite062009
kinase activity 5.3287080791198 bayes_pls_golite062009
protein kinase activity 5.17195961442593 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 4.96052051118534 bayes_pls_golite062009
protein serine/threonine kinase activity 4.46381887831481 bayes_pls_golite062009
transferase activity 3.97138602499442 bayes_pls_golite062009
ATP binding 1.97600611746091 bayes_pls_golite062009
adenyl ribonucleotide binding 1.93596671856664 bayes_pls_golite062009
adenyl nucleotide binding 1.90928021591891 bayes_pls_golite062009
purine ribonucleotide binding 1.65732943334212 bayes_pls_golite062009
ribonucleotide binding 1.65726906484847 bayes_pls_golite062009
purine nucleotide binding 1.63763394711025 bayes_pls_golite062009
nucleotide binding 1.63195828048121 bayes_pls_golite062009
binding 1.51590581981342 bayes_pls_golite062009
protein tyrosine kinase activity 1.3898059094397 bayes_pls_golite062009
receptor signaling protein serine/threonine kinase activity 1.38496328649031 bayes_pls_golite062009
protein binding 1.36269611679417 bayes_pls_golite062009
receptor signaling protein activity 1.27291233344322 bayes_pls_golite062009
catalytic activity 1.21655087018101 bayes_pls_golite062009
transmembrane receptor protein kinase activity 0.684204466593894 bayes_pls_golite062009
protein serine/threonine/tyrosine kinase activity 0.48345772948903 bayes_pls_golite062009
protein phosphorylated amino acid binding 0.43808715710519 bayes_pls_golite062009
magnesium ion binding 0.393328812780268 bayes_pls_golite062009
MAP kinase kinase kinase activity 0.37115026509016 bayes_pls_golite062009
MAP kinase kinase activity 0.35402045013148 bayes_pls_golite062009
transmembrane receptor protein tyrosine kinase activity 0.196560862858137 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle