| Protein: | thp1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 325 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for thp1.
| Description | E-value | Query Range |
Subject Range |
|
|
271.0 | [0..55] | [323..21] |
|
|
253.0 | [0..64] | [324..33] |
|
|
253.0 | [0..55] | [323..21] |
|
Region A: Residues: [1-128] |
1 11 21 31 41 51
| | | | | |
1 MNDIETRDTG TKNDNSSEFN LSVKSHKRKR SFDDENLELE ESREETSGGI LKKAKTQSFS 60
61 ESLERFRFAH AGSNNEYRKT DVVKNSDTDN GLLKSAVETI TLENGLRNRR VNVTKKSTLK 120
121 ASVKKSTL
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [129-325] |
1 11 21 31 41 51
| | | | | |
1 KKKNEVDPAL LQGVPDYICE NPYAIIVGLN PGITSSLKGH AFASPSNRFW KMLNKSKLLE 60
61 GNAEFTYLND KDLPAHGLGI TNLCARPSSS GADLRKEEMQ DGARILYEKV KRYRPQVGLF 120
121 ISGKGIWEEM YKMLTGKKLP KTFVFGWQPE KFGDANVFVG ISSSGRAAGY SDEKKQNLWN 180
181 LFAEEVNRHR EIVKHAV
|
| Detection Method: | |
| Confidence: | 59.0 |
| Match: | 1wywA |
| Description: | Crystal Structure of SUMO1-conjugated thymine DNA glycosylase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA N-glycosylase activity | 5.22461096584694 | bayes_pls_golite062009 |
| hydrolase activity, hydrolyzing N-glycosyl compounds | 4.68115068202636 | bayes_pls_golite062009 |
| uracil DNA N-glycosylase activity | 4.48822773983461 | bayes_pls_golite062009 |
| hydrolase activity, acting on glycosyl bonds | 2.66280504021689 | bayes_pls_golite062009 |
| hydrolase activity | 1.91716804176625 | bayes_pls_golite062009 |
| catalytic activity | 1.59111295908728 | bayes_pls_golite062009 |
| binding | 1.2276262882727 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.22310035950527 | bayes_pls_golite062009 |
| nucleic acid binding | 0.901890891144085 | bayes_pls_golite062009 |
| DNA binding | 0.850361767185031 | bayes_pls_golite062009 |
| transcription regulator activity | 0.543168797464517 | bayes_pls_golite062009 |
| single-stranded DNA binding | 0.48698673207018 | bayes_pls_golite062009 |
| protein binding | 0.272261244770552 | bayes_pls_golite062009 |
