YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: mae2
Organism: Schizosaccharomyces pombe
Length: 565 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mae2.

Description E-value Query
Range
Subject
Range
gi|1561774 - gi|1561774|gb|AAB08874.1| malate dehydrogenase [Vitis vinifera]
811.0 [0..3] [564..84]
gi|46850200 - gi|46850200|gb|AAT02533.1| NADP-dependent malic enzyme 1 [Hydrilla verticillata]
810.0 [0..3] [564..98]
gi|125551105 - gi|125551105|gb|EAY96814.1| hypothetical protein OsI_18741 [Oryza sativa Indica Group]
gi|215687316, gi... - gb|AAV31249.1| NADP malic enzyme [Oryza sativa (japonica cultivar-group)], gi|37694731|gb|AAQ99276.1...
807.0 [0..3] [564..14]
gi|4239891 - gi|4239891|dbj|BAA74735.1| NADP-malic enzyme [Aloe arborescens]
807.0 [0..3] [564..29]
MAOC_FLAPR - NADP-dependent malic enzyme, chloroplastic OS=Flaveria pringlei GN=MODA PE=2 SV=1
804.0 [0..3] [564..91]
MAOC_ORYSA - (P43279) NADP-dependent malic enzyme, chloroplast precursor (EC 1.1.1.40) (NADP-ME)
803.0 [0..4] [564..83]

Back

Predicted Domain #1
Region A:
Residues: [1-565]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAGTKEQIE CPLKGVTLLN SPRYNKDTAF TPEERQKFEI SSRLPPIVET LQQQVDRCYD  60
   61 QYKAIGDEPL QKNLYLSQLS VTNQTLFYAL ISQHLIEMIP IIYTPTEGDA IKQFSDIYRY 120
  121 PEGCYLDIDH NDLSYIKQQL SEFGKSDSVE YIIITDSEGI LGIGDQGVGG VLISVAKGHL 180
  181 MTLCAGLDPN RFLPIVLDVG TNNETHRKNH QYMGLRKDRV RGEQYDSFLD NVIKAIREVF 240
  241 PEAFIHFEDF GLANAKRILD HYRPDIACFN DDIQGTGAVA LAAIIGALHV TKSPLTEQRI 300
  301 MIFGAGTAGV GIANQIVAGM VTDGLSLDKA RGNLFMIDRC GLLLERHAKI ATDGQKPFLK 360
  361 KDSDFKEVPS GDINLESAIA LVKPTILLGC SGQPGKFTEK AIREMSKHVE RPIIFPISNP 420
  421 TTLMEAKPDQ IDKWSDGKAL IATGSPLPPL NRNGKKYVIS QCNNALLYPA LGVACVLSRC 480
  481 KLLSDGMLKA ASDALATVPR SLFAADEALL PDLNNAREIS RHIVFAVLKQ AVSEGMSTVD 540
  541 LPKDDAKLKE WIIEREWNPE YKPFV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1gq2A
Description: Mitochondrial NAD(P)-dependenent malic enzyme
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
malate dehydrogenase activity 4.38786524125089 bayes_pls_golite062009
oxidoreductase activity 3.09625241707629 bayes_pls_golite062009
catalytic activity 1.79741889688267 bayes_pls_golite062009
oxidoreductase activity, acting on CH-OH group of donors 1.65338499044318 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 1.47309297191111 bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor 1.29842732066898 bayes_pls_golite062009
alcohol dehydrogenase (NAD) activity 1.27032644348698 bayes_pls_golite062009
malic enzyme activity 1.2147813077436 bayes_pls_golite062009
retinol dehydrogenase activity 1.16811519855038 bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH 1.01627645289834 bayes_pls_golite062009
NAD or NADH binding 0.74536049628503 bayes_pls_golite062009
alcohol dehydrogenase activity, zinc-dependent 0.729242797855749 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 0.527946013169731 bayes_pls_golite062009
DNA binding 0.525227236870065 bayes_pls_golite062009
glutamate dehydrogenase (NADP+) activity 0.476857036112561 bayes_pls_golite062009
nucleic acid binding 0.459537641913493 bayes_pls_golite062009
binding 0.429102711245135 bayes_pls_golite062009
coenzyme binding 0.35922330382799 bayes_pls_golite062009
transcription regulator activity 0.152651308844322 bayes_pls_golite062009
malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity 0.120195861875768 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle