YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: dod-PA
Organism: Drosophila melanogaster
Length: 166 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dod-PA.

Description E-value Query
Range
Subject
Range
gi|119604464 - gi|119604464|gb|EAW84058.1| protein (peptidylprolyl cis/trans isomerase) NIMA-interacting 1, isoform...
gi|114675259 - gi|114675259|ref|XP_001161914.1| PREDICTED: similar to Chain B, Structural Basis For The Phosphoseri...
172.0 [0..1] [165..1]
gi|10120798 - gi|10120798|pdb|1F8A|B Chain B, Structural Basis For The Phosphoserine-Proline Recognition By Group ...
171.0 [0..1] [165..5]
gi|47218949 - gi|47218949|emb|CAF98147.1| unnamed protein product [Tetraodon nigroviridis]
169.0 [0..1] [166..1]
gi|61358821 - gi|61358821|gb|AAX41625.1| protein NIMA-interacting 1 [synthetic construct]
169.0 [0..1] [165..1]
gi|41152183, gi|... - gi|41152183|ref|NP_957042.1| protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1 [Danio...
169.0 [0..1] [165..1]
PIN1_BOVIN - Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Bos taurus GN=PIN1 PE=2 SV=1
168.0 [0..1] [165..1]
PIN1_MACFA - Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Macaca fascicularis GN=PIN1 PE=2 SV=1
168.0 [0..1] [165..1]
gi|148234054, gi... - gi|77748402|gb|AAI06674.1| LOC503670 protein [Xenopus laevis], gi|50416500|gb|AAH77181.1| LOC503670 ...
167.0 [0..1] [165..1]
gi|66563115 - gi|66563115|ref|XP_624205.1| PREDICTED: similar to Protein dodo [Apis mellifera]
166.0 [0..1] [166..1]

Back

Predicted Domain #1
Region A:
Residues: [1-166]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDAEQLPDG WEKRTSRSTG MSYYLNMYTK ESQWDQPTEP AKKAGGGSAG GGDAPDEVHC  60
   61 LHLLVKHKGS RRPSSWREAN ITRTKEEAQL LLEVYRNKIV QQEATFDELA RSYSDCSSAK 120
  121 RGGDLGKFGR GQMQAAFEDA AFKLNVNQLS GIVDSDSGLH IILRKA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 43.0
Match: 1f8aB
Description: Mitotic rotamase PIN1; Mitotic rotamase PIN1, domain 2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
peptidyl-prolyl cis-trans isomerase activity 4.0615867467963 bayes_pls_golite062009
cis-trans isomerase activity 3.99265212272703 bayes_pls_golite062009
transcription regulator activity 2.64797495383748 bayes_pls_golite062009
isomerase activity 2.31710030777753 bayes_pls_golite062009
transcription activator activity 2.28375305944516 bayes_pls_golite062009
transcription factor binding 2.18630749239417 bayes_pls_golite062009
transcription cofactor activity 2.07432061489599 bayes_pls_golite062009
transcription coactivator activity 2.02433252968502 bayes_pls_golite062009
transcription repressor activity 1.81795522051605 bayes_pls_golite062009
macrolide binding 1.71427500929512 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 1.68688812199737 bayes_pls_golite062009
kinase activity 1.67904764195462 bayes_pls_golite062009
binding 1.63170667962375 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.57898291235576 bayes_pls_golite062009
FK506 binding 1.49236065710546 bayes_pls_golite062009
protein kinase activity 1.45320632553313 bayes_pls_golite062009
transferase activity 1.34122735969662 bayes_pls_golite062009
transcription corepressor activity 0.911388717587011 bayes_pls_golite062009
catalytic activity 0.885282592863018 bayes_pls_golite062009
transcription elongation regulator activity 0.75548957875935 bayes_pls_golite062009
protein serine/threonine kinase activity 0.671059013500415 bayes_pls_golite062009
SMAD binding 0.325741923624893 bayes_pls_golite062009
unfolded protein binding 0.27473817613726 bayes_pls_golite062009
protein binding 0.0371998661994551 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle