| Protein: | l(1)G0007-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1222 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for l(1)G0007-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
779.0 | [0..4] | [1222..2] |
|
Region A: Residues: [1-203] |
1 11 21 31 41 51
| | | | | |
1 MSDDDESGVH RLEGTAGQET RGGLVIRKPK DAGAGGGGGF KVPQGSMLGL DKLAAKRRAE 60
61 KERSERLISF KDSEFDDTGG GSSTPQANAS GASSEFAFKK PDTKSFEKLR GQLREHKDDT 120
121 PSHTGGVSEK ARERLREHIQ RDRKRGPVSS TAAEGRDRDR DWDRDRRRDR DRDRDRDRDR 180
181 RQHRERERDR HRSWDRDRGR DRD
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [204-392] |
1 11 21 31 41 51
| | | | | |
1 RDRSMSERSV HTPREPGTPG GSSGGISNSS WDDEDGEFGQ RKSDWDMPTP RRHGNKSGDW 60
61 SVRSGGSRRN HGRQDDTVRP TPAHRYNQWA HGRKRSGATP WGEDPESLDL WEEEQRRLDR 120
121 EWYNIDEGYD DENNPFGGPN SEYFRKREEQ LEQKRTKRIS AQQRQNNRDN ELWERNRMLT 180
181 SGVVTLISV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [393-515] |
1 11 21 31 41 51
| | | | | |
1 NDDFDEEALE RVHLLVHHII PPFLDGRIVF TKQPEPVVPV KDPTSDMALL ARKGSALVRN 60
61 YREQKERRKA QKKHWELSGT KLGNIMGVQR PQDEDDMRFD KEKDKADYRK DQKFADHMRD 120
121 QDT
|
| Detection Method: | |
| Confidence: | 66.045757 |
| Match: | 2db3A |
| Description: | No description for 2db3A was found. |
|
Region A: Residues: [516-1090] |
1 11 21 31 41 51
| | | | | |
1 GGKSDFSRKK TISEQRRFLP VFASRQELLN VIRENSVIII VGETGSGKTT QLTQYLHEDG 60
61 YSKRGMIGCT QPRRVAAMSV AKRVSDEMDT QLGEDVGYAI RFEDCTSERT VIKYMTDGIL 120
121 LRESLRDPEL DSYSAIIMDE AHERSLSTDV LFGLLREIVA RRHDLKLIVT SATMDSSKFA 180
181 TFFGNVPTFT IPGRTFPVDV MFSKNTCEDY VESAVKQALQ VHLTPNEGDM LIFMPGQEDI 240
241 EVTCEVLEER LAEIDNAPAL SILPIYSQLP SDLQAKIFQK SSDGLRKCVV ATNIAETSLT 300
301 VDGIIYVIDS GYCKLKVYNP RIGMDALQIY PISQANANQR SGRAGRTGPG QAYRLYTQRQ 360
361 YKDELLALTV PEIQRTNLAN TVLLLKSLGV VDLLQFHFMD PPPQDNILNS LYQLWILGAL 420
421 DHTGALTTLG RQMAEFPLDP PQCQMLIVAC RMGCSAEVLI IVSMLSVPSI FYRPKGREDE 480
481 ADGVREKFQR PESDHLTYLN VYQQWRQNNY SSTWCNEHFI HIKAMRKVRE VRQQLKDIMT 540
541 QQNLSVISCG IDWDIVRKCI CSAYFYQAAR LKGIG
|
| Detection Method: | |
| Confidence: | 26.09691 |
| Match: | 2p6rA |
| Description: | No description for 2p6rA was found. |
| Term | Confidence | Notes |
| 4.704140727858 | bayes_pls_golite062009 | |
| binding | 2.44689197844883 | bayes_pls_golite062009 |
| RNA binding | 2.29590582680214 | bayes_pls_golite062009 |
| structural constituent of ribosome | 1.57653963868443 | bayes_pls_golite062009 |
| RNA helicase activity | 1.42791449104435 | bayes_pls_golite062009 |
| nucleic acid binding | 1.41477043612798 | bayes_pls_golite062009 |
| RNA-dependent ATPase activity | 1.39335733374328 | bayes_pls_golite062009 |
| ATP-dependent RNA helicase activity | 1.36724390116598 | bayes_pls_golite062009 |
| DNA binding | 1.11699929651302 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| transcription regulator activity | 0.989226939888218 | bayes_pls_golite062009 |
| mRNA binding | 0.76699944561918 | bayes_pls_golite062009 |
| helicase activity | 0.6191010101321 | bayes_pls_golite062009 |
| motor activity | 0.61636596887462 | bayes_pls_golite062009 |
| structural molecule activity | 0.596382945962261 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.461763181659193 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.458831409927227 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.455976987338331 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.422944846459286 | bayes_pls_golite062009 |
| snRNA binding | 0.418985924846052 | bayes_pls_golite062009 |
| DNA insertion or deletion binding | 0.36048959456844 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.338958888186454 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 0.29664013896754 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 0.29664013896754 | bayes_pls_golite062009 |
| translation release factor activity | 0.178286731022211 | bayes_pls_golite062009 |
| translation termination factor activity | 0.151456842619444 | bayes_pls_golite062009 |
| nucleotide binding | 0.114848452385726 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.10713474095071 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.0916519414118148 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.0915913646217636 | bayes_pls_golite062009 |
| protein binding | 0.071010918255742 | bayes_pls_golite062009 |
| transcription factor activity | 0.0434163635422169 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.0272673919333979 | bayes_pls_golite062009 |
|
Region A: Residues: [1091-1222] |
1 11 21 31 41 51
| | | | | |
1 EYVNLRTGMP CHLHPTSALY GLGTTPDYVV YHELIMTAKE YMQCATAVDG YWLAELGPMF 60
61 FSVKESGRSG REKKKQAAEH LKEMEEQMLK AQHEMEERKQ QAAEREEQLA TKQEIATPGN 120
121 ATPRRTPARI GL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
