| Protein: | otu-PC, otu-PB |
| Organism: | Drosophila melanogaster |
| Length: | 853 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for otu-PC, otu-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
619.0 | [0..1] | [853..1] |
|
Region A: Residues: [1-230] |
1 11 21 31 41 51
| | | | | |
1 MDMQVQRPIT SGSRQAPDPY DQYLESRGLY RKHTARDASS LFRVIAEQMY DTQMLHYEIR 60
61 LECVRFMTLK RRIFEKEIPG DFDSYMQDMS KPKTYGTMTE LRAMSCLYRR NVILYEPYNM 120
121 GTSVVFNRRY AENFRVFFNN ENHFDSVYDV EYIERAAICQ SIAFKLLYQK LFKLPDVSFA 180
181 VEIMLHPHTF NWDRFNVEFD DKGYMVRIHC TDGRVFKLDL PGDTNCILEN
|
| Detection Method: |  |
| Confidence: | 2.3 |
| Match: | 1tffA |
| Description: | Structure of Otubain-2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 1.88517380556644 | bayes_pls_golite062009 |
| binding | 1.28926196684576 | bayes_pls_golite062009 |
| catalytic activity | 0.995453662223124 | bayes_pls_golite062009 |
| nucleic acid binding | 0.896894355256917 | bayes_pls_golite062009 |
| transcription regulator activity | 0.864586149211676 | bayes_pls_golite062009 |
| DNA binding | 0.816807038934629 | bayes_pls_golite062009 |
| cysteine-type peptidase activity | 0.549530710974169 | bayes_pls_golite062009 |
| peptidase activity | 0.302979577950347 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 0.292810452153222 | bayes_pls_golite062009 |
| transcription activator activity | 0.188306014444124 | bayes_pls_golite062009 |
| transcription factor activity | 0.0522574655989047 | bayes_pls_golite062009 |
|
Region A: Residues: [231-387] |
1 11 21 31 41 51
| | | | | |
1 YKLCNFHSTN GNQSINARKG GRLEIKNQEE RKASGSSGHE PNDLLPMCPN RLESCVRQLL 60
61 DDGISPFPYK VAKSMDPYMY RNIEFDCWND MRKEAKLYNV YINDYNFKVG AKCKVELPNE 120
121 TEMYTCHVQN ISKDKNYCHV FVERIGKEIV VPYESLH
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [388-601] |
1 11 21 31 41 51
| | | | | |
1 PLPPDEYRPW SLPFRYHRQM PRLPLPKYAG KANKSSKWKK NKLFEMDQYF EHSKCDLMPY 60
61 MPVDNCYQGV HIQDDEQRDH NDPEQNDQNP TTEQRDREEP QAQKQHQRTK ASRVQPQNSS 120
121 SSQNQEVSGS AAPPPTQYMN YVPMIPSRPG HLPPPWPASP MAIAEEFPFP ISGTPHPPPT 180
181 EGCVYMPFGG YGPPPPGAVA LSGPHPFMPL PSPP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [602-719] |
1 11 21 31 41 51
| | | | | |
1 LNVTGIGEPR RSLHPNGEDL PVDMVTLRYF YNMGVDLHWR MSHHTPPDEL GMFGYHQQNN 60
61 TDQQAGRTVV IGATEDNLTA VESTPPPSPE VANATEQSPL EKSAYAKRNL NSVKVRGK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [720-853] |
1 11 21 31 41 51
| | | | | |
1 RPEQLQDIKD SLGPAAFLPT PTPSPSSNGS QFSFYTTPSP HHHLITPPRL LQPPPPPPIF 60
61 YHKAGPPQLG GAAQGQTPYA WGMPAPVVSP YEVINNYNMD PSAQPQQQQP ATLQPAPLSV 120
121 QSQPAAVYAA TRHH
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
