| Protein: | br-PI, br-PH, br... |
| Organism: | Drosophila melanogaster |
| Length: | 880 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for br-PI, br-PH, br....
| Description | E-value | Query Range |
Subject Range |
|
|
578.0 | [0..111] | [878..461] |
|
Region A: Residues: [1-149] |
1 11 21 31 41 51
| | | | | |
1 MDDTQHFCLR WNNYQSSITS AFENLRDDEA FVDVTLACEG RSIKAHRVVL SACSPYFREL 60
61 LKSTPCKHPV ILLQDVNFMD LHALVEFIYH GEVNVHQKSL QSFLKTAEVL RVSGLTQQQA 120
121 EDTHSHLAQI QNLANSGGRT PLNTHTQSL
|
| Detection Method: |  |
| Confidence: | 34.522879 |
| Match: | 2nn2A |
| Description: | No description for 2nn2A was found. |
|
Region A: Residues: [150-210] |
1 11 21 31 41 51
| | | | | |
1 PHPHHGSLHD DGGSSTLFSR QGAGSPPPTA VPSLPSHINN QLLKRMAMMH RSSAAAAAEE 60
61 T
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [211-296] |
1 11 21 31 41 51
| | | | | |
1 SHAFKRLRGS DNSLPLSGAV GSGSNNNSPD LPPLHARSAS PQQTPADFST IKHHNNNNTP 60
61 PLKEEKRNGP TGNGNSGNGN GNGNGA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [297-479] |
1 11 21 31 41 51
| | | | | |
1 SNGNGISISD KLGSLTPSPL ARAGADDVKS EPMDMVCSNN NANANDEHSN DSTGEHDANR 60
61 SSSGDGGKGS LSSGNDEEIG DGLASHHAAP QFIMSPAENK MFHAAAFNFP NIDPSALLGL 120
121 NTQLQQSGDL AVSPQGGSTG SLLSGVIVPG GSGGTPSNSS SNNNNNNSNN QQQKVEQQSS 180
181 PHQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [480-606] |
1 11 21 31 41 51
| | | | | |
1 LLQQQHHSTP HTNSPQLKQE QPKSGGGSCK SSDLHIAAGS ERSLSRSSQG MPDAGGHSAT 60
61 PSPTAAYHKR ERERERERER ERERERERSL DHERDLERPG GTGSPPPPPP SHHSHFGQHP 120
121 LSLLPSH
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [607-696] |
1 11 21 31 41 51
| | | | | |
1 HQLHATHHEL SAAAAHHAHA HAHAAHAHAL ARAGSPMEHH HLLHHRRASL SPSGAVSSAS 60
61 GAGGRGGGAG GPGGPGGSLL SSVRAQDVAQ
|
| Detection Method: | |
| Confidence: | 11.0 |
| Match: | 1tf6A |
| Description: | Transcription factor IIIA, TFIIIA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 4.70988788192472 | bayes_pls_golite062009 |
| nucleic acid binding | 4.58713908116892 | bayes_pls_golite062009 |
| DNA binding | 4.56219307357342 | bayes_pls_golite062009 |
| transcription activator activity | 3.52873291636993 | bayes_pls_golite062009 |
| transcription factor activity | 3.50954949535763 | bayes_pls_golite062009 |
| transcription repressor activity | 3.27542149084008 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 3.22082323675675 | bayes_pls_golite062009 |
| binding | 3.10743787485868 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.53101891154822 | bayes_pls_golite062009 |
| chromatin binding | 2.18464662431232 | bayes_pls_golite062009 |
| protein binding | 2.05530362750351 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 1.63161912031789 | bayes_pls_golite062009 |
| transcription factor binding | 1.39608963544799 | bayes_pls_golite062009 |
| transcription corepressor activity | 1.34049786451995 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.77874411480713 | bayes_pls_golite062009 |
| catalytic activity | 0.245893663605433 | bayes_pls_golite062009 |
|
Region A: Residues: [697-880] |
1 11 21 31 41 51
| | | | | |
1 ANRLLLPLPL NACHRCDVCG KLLSTKLTLK RHKEQQHLQP LNNAVCNLCH KVFRTLNSLN 60
61 NHKSIYHRRQ KNHHSYFHHG AGVSQAGSPG SRLHQSLSSL SAAAAAANNS VNVGGGSVGG 120
121 AGGNAVAAAA AAAAAAAELL LSPIVGAAAV AGGTASSTLQ LAAAHQQQQQ QSSPGIVKPC 180
181 MDFL
|
| Detection Method: | |
| Confidence: | 40.045757 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
