| Protein: | niki-PA |
| Organism: | Drosophila melanogaster |
| Length: | 841 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for niki-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
517.0 | [0..1] | [839..1] |
|
Region A: Residues: [1-100] |
1 11 21 31 41 51
| | | | | |
1 MKKFRAKASS LPIFNGRITD ATTLTTSSLQ LPLGQNTQRK QSTCTRVLPT VFTITDGTTG 60
61 AASTSLAEAM SSSKAQMPNR QESLLQLSVP RETGVGVAGP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [101-370] |
1 11 21 31 41 51
| | | | | |
1 ELANYEKVRV VGQGSFGIAI LYRRKSDGHQ IVFKQINLSE LSPPGRDLAM NEVDVFSKLH 60
61 HPNIVSYLGS FIKDNTLLIE MEYADGGTLA QIIAERQGKL HFPERYIIAV FEQISSAINY 120
121 MHSENILHRD LKTANVFLNR RGIVKIGDFG ISKIMNTKIH AQTVLGTPYY FSPEMCEGKE 180
181 YDNKSDIWAL GCILGEMCCL KKTFAASNLS ELVTKIMAGN YTPVPSGYTS GLRSLMSNLL 240
241 QVEAPRRPTA SEVLVYWIPL IFRSLGKNKG
|
| Detection Method: | |
| Confidence: | 49.39794 |
| Match: | 2javA |
| Description: | No description for 2javA was found. |
| Term | Confidence | Notes |
| protein kinase activity | 5.4586557943719 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 5.04467222534257 | bayes_pls_golite062009 |
| kinase activity | 4.85903980916957 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 4.63692708178478 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 4.46381887831481 | bayes_pls_golite062009 |
| transferase activity | 3.26787750561728 | bayes_pls_golite062009 |
| binding | 2.74863538127007 | bayes_pls_golite062009 |
| protein binding | 2.276111749106 | bayes_pls_golite062009 |
| tubulin binding | 2.18641675163967 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.12615078788254 | bayes_pls_golite062009 |
| ATP binding | 1.97600611746091 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 1.93596671856664 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 1.90928021591891 | bayes_pls_golite062009 |
| microtubule binding | 1.88110801192607 | bayes_pls_golite062009 |
| telethonin binding | 1.75733591474207 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 1.65732943334212 | bayes_pls_golite062009 |
| ribonucleotide binding | 1.65726906484847 | bayes_pls_golite062009 |
| purine nucleotide binding | 1.63763394711025 | bayes_pls_golite062009 |
| nucleotide binding | 1.63195828048121 | bayes_pls_golite062009 |
| protein tyrosine kinase activity | 1.3898059094397 | bayes_pls_golite062009 |
| receptor signaling protein serine/threonine kinase activity | 1.38496328649031 | bayes_pls_golite062009 |
| actin binding | 1.33479685165255 | bayes_pls_golite062009 |
| gamma-tubulin binding | 1.28511591054866 | bayes_pls_golite062009 |
| receptor signaling protein activity | 1.27291233344322 | bayes_pls_golite062009 |
| catalytic activity | 1.21655087018101 | bayes_pls_golite062009 |
| alpha-actinin binding | 0.877087652539674 | bayes_pls_golite062009 |
| MAP kinase activity | 0.81943579965027 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.612883428421652 | bayes_pls_golite062009 |
| transporter activity | 0.553953601841147 | bayes_pls_golite062009 |
| cyclin-dependent protein kinase activity | 0.499492353295369 | bayes_pls_golite062009 |
| magnesium ion binding | 0.393328812780268 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.37676337669549 | bayes_pls_golite062009 |
| signal transducer activity | 0.270054246024761 | bayes_pls_golite062009 |
| molecular transducer activity | 0.270054246024761 | bayes_pls_golite062009 |
| actin filament binding | 0.2403700250846 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.0611721261859464 | bayes_pls_golite062009 |
| transmembrane receptor protein kinase activity | 0.0556163711947139 | bayes_pls_golite062009 |
| transmembrane receptor activity | 0.00652065412910241 | bayes_pls_golite062009 |
|
Region A: Residues: [371-470] |
1 11 21 31 41 51
| | | | | |
1 YSYEDDVGGP GSDQLTAPVP AAAYSNVSME LELPTAQTET KQLMIADTAA PHEILEKRSV 60
61 LYQLKAFGTC FSMAPIQLPP KAVIVDVAMS DSHFVVVNED
|
| Detection Method: | |
| Confidence: | 3.73 |
| Match: | 1a12A |
| Description: | Regulator of chromosome condensation RCC1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [471-841] |
1 11 21 31 41 51
| | | | | |
1 GSAYAWGEGT HGQLGLTALE AWKHYPSRME SVRNYHVVSA CAGDGFTILV TQAGSLLSCG 60
61 SNAHLALGQD EQRNYHSPKL IARLADVRVE QVAAGLQHVL ALSREGAVYV WGTSTCGALG 120
121 LGNYQQQQKF PQKILLSHVK TKPSKIYCGP DTSAVLFANG ELHVCGSNDY NKLGFQRSAK 180
181 ITAFKKVQLP HKVTQACFSS THSVFLVEGG YVYTMGRNAE GQRGIRHCNS VDHPTLVDSV 240
241 KSRYIVKANC SDQCTIVASE DNIITVWGTR NGLPGIGSTN CGLGLQICTP NMELELGNNT 300
301 AAFTNFLASV YKSELILEPV DILALFSSKE QCDRGYYVQV HDVYPLAHSV LVLVDTTTPL 360
361 ISSYEGDYPH L
|
| Detection Method: | |
| Confidence: | 90.69897 |
| Match: | 1a12A |
| Description: | Regulator of chromosome condensation RCC1 |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| Ran guanyl-nucleotide exchange factor activity | 1.99390987036621 | bayes_pls_golite062009 |
| binding | 1.94765972306941 | bayes_pls_golite062009 |
| protein binding | 1.61885402246805 | bayes_pls_golite062009 |
| GTPase regulator activity | 1.59687876910551 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 1.57610576713427 | bayes_pls_golite062009 |
| guanyl-nucleotide exchange factor activity | 1.52467418230017 | bayes_pls_golite062009 |
| small GTPase regulator activity | 1.49148933341823 | bayes_pls_golite062009 |
| Ras guanyl-nucleotide exchange factor activity | 1.40097482342838 | bayes_pls_golite062009 |
| chromatin binding | 1.1028187707197 | bayes_pls_golite062009 |
| enzyme regulator activity | 1.09962825840688 | bayes_pls_golite062009 |
| histone binding | 0.76536700536926 | bayes_pls_golite062009 |
| catalytic activity | 0.261970921089142 | bayes_pls_golite062009 |
