| Protein: | CG12267-PA, FBpp... |
| Organism: | Drosophila melanogaster |
| Length: | 522 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG12267-PA, FBpp....
| Description | E-value | Query Range |
Subject Range |
|
|
609.0 | [0..1] | [509..1] |
|
Region A: Residues: [1-135] |
1 11 21 31 41 51
| | | | | |
1 MSADYSHLSS AILEQCFGKV VQAVADCLFS ATTRTLGQIT SATKLSRKEV AFALAVLVKF 60
61 RLVDFAASKA NPFLAEYALR REDVLCLLRY PRYVHLVQTK YGNVGASISE ELINSGSDTA 120
121 TGILLKCLAE NENKA
|
| Detection Method: |  |
| Confidence: | 1.31 |
| Match: | 1sfxA |
| Description: | X-ray crystal structure of putative HTH transcription regulator from Archaeoglobus fulgidus |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 5.23858959608048 | bayes_pls_golite062009 |
| DNA binding | 4.78517210147551 | bayes_pls_golite062009 |
| nucleic acid binding | 4.72059012764202 | bayes_pls_golite062009 |
| DNA-directed RNA polymerase activity | 4.34522534923857 | bayes_pls_golite062009 |
| RNA polymerase activity | 4.34522534923857 | bayes_pls_golite062009 |
| transcription factor activity | 4.02736190679869 | bayes_pls_golite062009 |
| binding | 3.37660003833383 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 2.82260867370675 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.21432668306508 | bayes_pls_golite062009 |
| transferase activity | 2.21031006146354 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 2.16473039675898 | bayes_pls_golite062009 |
| transcription activator activity | 2.13702350917359 | bayes_pls_golite062009 |
| transcription repressor activity | 1.9708626903609 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.50332889556988 | bayes_pls_golite062009 |
| transcription factor binding | 0.752335897765285 | bayes_pls_golite062009 |
| protein binding | 0.726445167461826 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.451714629708561 | bayes_pls_golite062009 |
|
Region A: Residues: [136-316] |
1 11 21 31 41 51
| | | | | |
1 ESPESYRNTF LEMITDHYII KRPELLVGDD QDENVPKFET NECDFFRHPN IDLQLLAKIQ 60
61 KGEATLAEAR DSHMVWHLNH DRFHQDFRDT IMVDAIERKL GENAAECFKF ILKIMYNTTD 120
121 PWERKLSNQI TFVEIKQAIE RKSNNLDLMK YLDQYISLLT EDSLGFFRRV GDMGGGVYVV 180
181 D
|
| Detection Method: | |
| Confidence: | 38.522879 |
| Match: | PF05645.4 |
| Description: | No description for PF05645.4 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [317-437] |
1 11 21 31 41 51
| | | | | |
1 MEHAFESLAF ACVECVITER FGSKAARIFR VIRCKKYIEQ EDLQKEAMIP SKEAKSLAYN 60
61 LFQEQFIHVK IIKKPGGGSN GPAKAFYLFQ VKEKDTVRML LDASYKSLYN TIERSNFEKN 120
121 E
|
| Detection Method: | |
| Confidence: | 4.0 |
| Match: | 1q1hA |
| Description: | An extended winged helix domain in general transcription factor E/IIE alpha |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 5.55329976718261 | bayes_pls_golite062009 |
| DNA binding | 5.08959163553491 | bayes_pls_golite062009 |
| nucleic acid binding | 4.99681957904233 | bayes_pls_golite062009 |
| RNA polymerase activity | 4.38040357248614 | bayes_pls_golite062009 |
| DNA-directed RNA polymerase activity | 4.38040357248614 | bayes_pls_golite062009 |
| transcription factor activity | 4.33152142980289 | bayes_pls_golite062009 |
| binding | 3.52874320222492 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 2.80876790343695 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.48053910222825 | bayes_pls_golite062009 |
| transcription activator activity | 2.37668609508629 | bayes_pls_golite062009 |
| transcription repressor activity | 2.22485867684613 | bayes_pls_golite062009 |
| transferase activity | 2.17455387041569 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 2.13327310661537 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.70025468248325 | bayes_pls_golite062009 |
| transcription factor binding | 0.85714789329232 | bayes_pls_golite062009 |
| protein binding | 0.753698599635855 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.461477365615935 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 0.0856082199488197 | bayes_pls_golite062009 |
|
Region A: Residues: [438-522] |
1 11 21 31 41 51
| | | | | |
1 HKGLIEKSQR LDSIVEAMKE RGETDEYIAE IVETFTPPEC EILNKVKNRI KTLSKAELTL 60
61 DDTIFLLQMY QHHCTTLPTG IRKFK
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
