| Protein: | CG10535-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1252 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG10535-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
806.0 | [0..107] | [1252..1] |
|
Region A: Residues: [1-481] |
1 11 21 31 41 51
| | | | | |
1 MRNLKLRYCK ELNAVAHPQH LLLQPELNGG ASDIYFVVAD NKIYAVQESG DVRLKVIADL 60
61 PDIVGVEFLQ LDNAICVASG AGEVILVDPQ TGATSEGTFC DVGIESMAWS PNQEVVAFVT 120
121 RTHNVVLMTS TFDVIAEQPL DAELDPDQQF VNVGWGKKET QFHGSEGKQA AKQKESDSTF 180
181 IRDEQELNQD VSISWRGDGE FFVVSYVAAQ LGRTFKVYDS EGKLNHTAEK SANLKDSVVW 240
241 RPTGNWIAVP QQFPNKSTIA LFEKNGLRHR ELVLPFDLQE EPVVQLRWSE DSDILAIRTC 300
301 AKEEQRVYLY TIGNYHWYLK QVLIFEQADP LALLHWDTRC GAEHTLHVLK ESGKHLVYRW 360
361 AFAVDRNNSI VGVIDGKRLL LTDFDEAIVP PPMSKIVLKF ETYINAFISH GTSLWVYTCD 420
421 RKIYLNEHIH TLGKELQKPI MLMPDAELSG LHLANLTHFS PHYLLATHSS AGSTRLLLLS 480
481 Y
|
| Detection Method: |  |
| Confidence: | 49.522879 |
| Match: | 1nr0A |
| Description: | Actin interacting protein 1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| general RNA polymerase II transcription factor activity | 2.99343906593123 | bayes_pls_golite062009 |
| snoRNA binding | 2.77952316953921 | bayes_pls_golite062009 |
| binding | 2.42570478946173 | bayes_pls_golite062009 |
| 2.40807791198019 | bayes_pls_golite062009 | |
| transcription regulator activity | 2.3610959773142 | bayes_pls_golite062009 |
| nucleic acid binding | 2.30918780727915 | bayes_pls_golite062009 |
| DNA binding | 1.71685536470455 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.5281054405163 | bayes_pls_golite062009 |
| kinase activity | 1.5053563627859 | bayes_pls_golite062009 |
| RNA binding | 1.50295916950465 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.33036729957356 | bayes_pls_golite062009 |
| protein kinase activity | 1.3214585007945 | bayes_pls_golite062009 |
| protein binding | 1.21879977456466 | bayes_pls_golite062009 |
| transcription factor activity | 1.08768505897883 | bayes_pls_golite062009 |
| ligase activity | 0.93058496790047 | bayes_pls_golite062009 |
| transferase activity | 0.913674310517261 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.722742354759599 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.676924760416604 | bayes_pls_golite062009 |
| transcription repressor activity | 0.658573452658359 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 0.618638900707402 | bayes_pls_golite062009 |
| transcription factor binding | 0.489473003915035 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.30761651528651 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.28606552120995 | bayes_pls_golite062009 |
| transcription initiation factor activity | 0.262596110845942 | bayes_pls_golite062009 |
| structural molecule activity | 0.254012051644049 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.182612389752591 | bayes_pls_golite062009 |
| chromatin binding | 0.151977098745772 | bayes_pls_golite062009 |
| actin binding | 0.00606924241186668 | bayes_pls_golite062009 |
|
Region A: Residues: [482-669] |
1 11 21 31 41 51
| | | | | |
1 KDNDNKPGEW FYRVHSSVRI NGLVNAVAVA PYAMNEFYVQ TVNNGHTYEV SLKADKTLKV 60
61 ERSYVQLHEP ADQIDWVIVK GCIWDGYTGA LVTLRNQHLL HIDGYRIGED VTSFCVVTNY 120
121 LVYTQLNAMH FVQLDDRRQV ASRNIERGAK IVTAVARKAR VVLQLPRGNL EAICPRVLVL 180
181 ELVGDLLE
|
| Detection Method: | |
| Confidence: | 3.39794 |
| Match: | 1ri6A |
| Description: | Structure of a putative isomerase from E. coli |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [670-1081] |
1 11 21 31 41 51
| | | | | |
1 RGKYQKAIEM SRKQRINLNI IFDHDVKRFV SSVGAFLNDI NEPQWLCLFL SELQNEDFTK 60
61 GMYSSNYDAS KQTYPSDYRV DQKVEYVCRL LEQQMNRFVS RFRLPLITAY VKLGCLEMAL 120
121 QVIWKEQQED ASLADQLLQH LLYLVDVNDL YNVALGTYDF GLVLFVAQKS QKDPKEFLPY 180
181 LNDLKALPID YRKFRIDDHL KRYTSALSHL AACGEQHYEE ALEYIRKHGL YTDGLAFYRE 240
241 HIEFQKNIYV AYADHLRAIA KLDNASLMYE RGGQLQQALL SAKHTLDWQR VLVLAKKLSE 300
301 PLDQVAQSLV GPLQQQGRHM EAYELVKEHC QDRKRQFDVL LEGHLYSRAI YEAGLEDDDV 360
361 SEKIAPALLA YGVQLESSLQ ADLQLFLDYK QRLLDIRRNQ AKSGEGYIDT DV
|
| Detection Method: | |
| Confidence: | 10.30103 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.71974493738804 | bayes_pls_golite062009 |
| transcription regulator activity | 2.36571535004008 | bayes_pls_golite062009 |
| transcription elongation regulator activity | 2.11470671770795 | bayes_pls_golite062009 |
| nucleic acid binding | 2.03244296439384 | bayes_pls_golite062009 |
| DNA binding | 1.95874073664777 | bayes_pls_golite062009 |
| protein binding | 1.6279032205159 | bayes_pls_golite062009 |
| RNA polymerase II transcription elongation factor activity | 1.2408748355559 | bayes_pls_golite062009 |
| transcription factor activity | 1.21805666483342 | bayes_pls_golite062009 |
| transferase activity | 1.14940839435601 | bayes_pls_golite062009 |
| ligase activity | 0.825764637499128 | bayes_pls_golite062009 |
| transcription factor binding | 0.518146612491969 | bayes_pls_golite062009 |
| RNA binding | 0.497066934302855 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.30464889749774 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.116119418380222 | bayes_pls_golite062009 |
| transcription activator activity | 0.0593768116971065 | bayes_pls_golite062009 |
|
Region A: Residues: [1082-1252] |
1 11 21 31 41 51
| | | | | |
1 NLKEVDLLSD TTSLHSSQYS GTSRRTGKTF RSSKNRRKHE RKLFSLKPGN PFEDIALIDA 60
61 LHNHVTKIAQ QQQPVRDTCK ALLQLANAAD ADPLAAALQR EFKTLLQAVD AALDEIWTPE 120
121 LRGNGLMADH LTGPNVDYLA LQKEQRYALL SPLKRFKPQL IMMDWQHEIL Q
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
