| Protein: | FBpp0308021 |
| Organism: | Drosophila melanogaster |
| Length: | 897 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0308021.
| Description | E-value | Query Range |
Subject Range |
|
|
746.0 | [0..1] | [897..1] |
|
Region A: Residues: [1-160] |
1 11 21 31 41 51
| | | | | |
1 MTTRLAPQRQ FILSTRSAIV DATSPPEDSA EEQQQLTVEV ESATNGVITN STTSPPPHAE 60
61 QFEFCTEDGV VVSATLEDVM TQVKLFPLLQ NCQLLQKKLV DEDDDSTGVG ATDADQLEVI 120
121 SVVLPMDAED STSDAHLHGH VVNSSSDTMG TITTTEPNGT
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [161-305] |
1 11 21 31 41 51
| | | | | |
1 TVTHSIPIHS MADLAAIKDG VDLAQQVANG QVTVVQTTED DDGTPFITVT VSGQEQNYQV 60
61 QYVDSELYHS NSSQTQMTYP FCPVGDYQGN GQTAYYSTTG QYGTTSSAGG SSNGAHSTTL 120
121 PYLVPVEEGI LLNGSAHSLS QSQSQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [306-358] |
1 11 21 31 41 51
| | | | | |
1 SHGRDSPHSL TEVAYIQEAQ STPQTPTSTT TTHSASGGSL GTGGGGASPD SDQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [359-507] |
1 11 21 31 41 51
| | | | | |
1 SALGSSNKIA SATIKWLSRN YETADGVSLP RSTLYNHYMQ HCSEHKLEPV NAASFGKLIR 60
61 SVFSGLRTRR LGTRGNSKYH YYGIRIKPGS LLNSQAMDDK QMLAAGYGPS SDGTGGPGSG 120
121 PMVSVTSSTA GQLTGSNGLG GGHGQRHSN
|
| Detection Method: | |
| Confidence: | 23.221849 |
| Match: | 1dp7P |
| Description: | Class II MHC transcription factor RFX1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 5.55329976718261 | bayes_pls_golite062009 |
| DNA binding | 5.08959163553491 | bayes_pls_golite062009 |
| nucleic acid binding | 4.69183445184264 | bayes_pls_golite062009 |
| transcription factor activity | 4.33152142980289 | bayes_pls_golite062009 |
| binding | 3.52874320222492 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.48053910222825 | bayes_pls_golite062009 |
| transcription activator activity | 2.37668609508629 | bayes_pls_golite062009 |
| transcription repressor activity | 2.22485867684613 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.70025468248325 | bayes_pls_golite062009 |
| transcription factor binding | 0.85714789329232 | bayes_pls_golite062009 |
| protein binding | 0.753698599635855 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 0.0856082199488197 | bayes_pls_golite062009 |
|
Region A: Residues: [508-611] |
1 11 21 31 41 51
| | | | | |
1 GTKKHTFKPE TYEACIQYIG DGTSALPSFP PIELNHSFNS ELTLEDVDTF RGLYREHCES 60
61 FLDAVLNLEF NTVEFLLRDF WRASDNNNLD ECEEEKYLSK TKLY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [612-809] |
1 11 21 31 41 51
| | | | | |
1 LLCHCAEVQK FVREVDYQFY QNTVDVIIPD VLRSIPNALT QAIRNFAKNL EIWLCESMLG 60
61 VPEQLAQIKT SAVSAFCQTL RRYTSLNHLA QAARAVLQNG AQISQMLSDL NRVDFHNVQE 120
121 QAAWVSQCAP AVVQRLESDF KAALQQQSSL EQWASWLQLV VESAMEEYNG KPTYARAARQ 180
181 FLLKWSFYSS MIIRDLTL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [810-897] |
1 11 21 31 41 51
| | | | | |
1 RSASSFGSFH LIRLLFDEYM FYLVEHKIAE AQDKTAIAVI CERMKKDMDF EFECQFAYIT 60
61 SDTEHQTTPS SASSGGDVGN EAKRLKQE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
