| Protein: | stck-PA, FBpp0297370 |
| Organism: | Drosophila melanogaster |
| Length: | 335 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for stck-PA, FBpp0297370.
| Description | E-value | Query Range |
Subject Range |
|
|
486.0 | [0..2] | [334..2516] |
|
Region A: Residues: [1-87] |
1 11 21 31 41 51
| | | | | |
1 MSLGAMHCTR CADGFEPTEK IVNSNGELWH TQCFVCAQCF RPFQDGIFYE FEGRKYCERD 60
61 FHVLFAPCCN KCGEFVIGRV IKAMSAS
|
| Detection Method: |  |
| Confidence: | 48.69897 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
|
Region A: Residues: [88-257] |
1 11 21 31 41 51
| | | | | |
1 WHPQCFRCQL CAKELADCGF IKNQNRALCH ECNAKVKAEI TGRYVCQKCH GLIDEEPLRF 60
61 RGEVYHGYHF SCTACGTELD STAREVKSRP GLAANDMNEL YCLRCHDKMG IPICGACRRP 120
121 IEERVVTALG KHWHVEHFVC AKCEKPFLGH RHYEKRGLAY CETHYHQLFG
|
| Detection Method: | |
| Confidence: | 13.154902 |
| Match: | 1tf6A |
| Description: | Transcription factor IIIA, TFIIIA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 4.70988788192472 | bayes_pls_golite062009 |
| nucleic acid binding | 4.58713908116892 | bayes_pls_golite062009 |
| DNA binding | 4.56219307357342 | bayes_pls_golite062009 |
| transcription activator activity | 3.52873291636993 | bayes_pls_golite062009 |
| transcription factor activity | 3.50954949535763 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 3.22082323675675 | bayes_pls_golite062009 |
| binding | 3.10743787485868 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.53101891154822 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.22104591928521 | bayes_pls_golite062009 |
| chromatin binding | 2.18464662431232 | bayes_pls_golite062009 |
| protein binding | 2.05530362750351 | bayes_pls_golite062009 |
| transcription repressor activity | 1.64349785387632 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 1.63161912031789 | bayes_pls_golite062009 |
| transcription factor binding | 1.39608963544799 | bayes_pls_golite062009 |
| molecular transducer activity | 1.12277938241964 | bayes_pls_golite062009 |
| signal transducer activity | 1.12277938241964 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.93314267845352 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.77874411480713 | bayes_pls_golite062009 |
| tubulin binding | 0.744315484113484 | bayes_pls_golite062009 |
| microtubule binding | 0.576452165256057 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.53991278722671 | bayes_pls_golite062009 |
| receptor activity | 0.36635758793995 | bayes_pls_golite062009 |
| catalytic activity | 0.245893663605433 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.10558148421807 | bayes_pls_golite062009 |
|
Region A: Residues: [258-335] |
1 11 21 31 41 51
| | | | | |
1 NLCFVCNQVI GGDVFTALNK AWCVHHFACS VCDTKMTQKS KFYEYDEKPV CKKCYDRFPN 60
61 ELRRRLRTAH EMTMKKNT
|
| Detection Method: | |
| Confidence: | 2.83 |
| Match: | 1v6gA |
| Description: | Solution Structure of the LIM Domain of the Human Actin Binding LIM Protein 2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 3.84932768708444 | bayes_pls_golite062009 |
| DNA binding | 3.45124926204188 | bayes_pls_golite062009 |
| nucleic acid binding | 3.34875987514951 | bayes_pls_golite062009 |
| actin binding | 3.16654971622305 | bayes_pls_golite062009 |
| binding | 2.8684204787273 | bayes_pls_golite062009 |
| transcription activator activity | 2.7888666510808 | bayes_pls_golite062009 |
| transcription factor activity | 2.74592237402384 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.5486735958299 | bayes_pls_golite062009 |
| protein binding | 2.35367391992524 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.30646484446275 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.23212813739998 | bayes_pls_golite062009 |
| steroid hormone receptor binding | 2.02476066647216 | bayes_pls_golite062009 |
| actin filament binding | 1.88094478345266 | bayes_pls_golite062009 |
| signal transducer activity | 1.80369432320498 | bayes_pls_golite062009 |
| molecular transducer activity | 1.80369432320498 | bayes_pls_golite062009 |
| nuclear hormone receptor binding | 1.75066160573374 | bayes_pls_golite062009 |
| androgen receptor binding | 1.71880332248998 | bayes_pls_golite062009 |
| receptor activity | 1.7066474077575 | bayes_pls_golite062009 |
| hormone receptor binding | 1.6861251260625 | bayes_pls_golite062009 |
| transcription factor binding | 1.22761682002 | bayes_pls_golite062009 |
| ligand-dependent nuclear receptor activity | 1.1269808729848 | bayes_pls_golite062009 |
| vinculin binding | 1.11009713416006 | bayes_pls_golite062009 |
| steroid hormone receptor activity | 1.06131001457937 | bayes_pls_golite062009 |
| structural constituent of ribosome | 1.0478696280786 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 1.02819346233483 | bayes_pls_golite062009 |
| structural molecule activity | 0.958501322313092 | bayes_pls_golite062009 |
| transporter activity | 0.893102092384062 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.7072042577999 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.551724917261005 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.489535882040485 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.449959641856445 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.256518766904171 | bayes_pls_golite062009 |
| transcription repressor activity | 0.199267983374872 | bayes_pls_golite062009 |
| myosin binding | 0.184990294745195 | bayes_pls_golite062009 |
| catalytic activity | 0.133319360419662 | bayes_pls_golite062009 |
