| Protein: | ato-PA |
| Organism: | Drosophila melanogaster |
| Length: | 312 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ato-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
201.0 | [0..1] | [312..1] |
|
Region A: Residues: [1-142] |
1 11 21 31 41 51
| | | | | |
1 MSSSEIYRYY YKTSEDLQGF KTAAAEPYFN PMAAYNPGVT HYQFNGNTLA SSSNYLSANG 60
61 FISFEQASSD GWISSSPASH RSESPEYVDL NTMYNGGCNN MAQNQQYGMI MEQSVVSTAP 120
121 AIPVASPPAV EVMGSSNVGT CK
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [143-235] |
1 11 21 31 41 51
| | | | | |
1 TIPASAGPKP KRSYTKKNQP STTATSTPTA AAESSASVNL YTEEFQNFDF DNSALFDDSV 60
61 EDDEDLMLFS GGEDFDGNDG SFDLADGENQ DAA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [236-312] |
1 11 21 31 41 51
| | | | | |
1 AGGSGKKRRG KQITPVVKRK RRLAANARER RRMQNLNQAF DRLRQYLPCL GNDRQLSKHE 60
61 TLQMAQTYIS ALGDLLR
|
| Detection Method: | |
| Confidence: | 14.221849 |
| Match: | 1nkpA |
| Description: | Myc prot-oncogene protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 5.38658950816179 | bayes_pls_golite062009 |
| DNA binding | 5.18654839258297 | bayes_pls_golite062009 |
| nucleic acid binding | 5.05768805749761 | bayes_pls_golite062009 |
| transcription factor activity | 4.78039531631248 | bayes_pls_golite062009 |
| binding | 3.81829206350975 | bayes_pls_golite062009 |
| transcription factor binding | 2.61163564741984 | bayes_pls_golite062009 |
| transcription activator activity | 2.5495467409976 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.48787404513864 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.31910036997977 | bayes_pls_golite062009 |
| protein binding | 1.59929864805879 | bayes_pls_golite062009 |
| transcription cofactor activity | 1.52770895937238 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity, enhancer binding | 1.46304579811572 | bayes_pls_golite062009 |
| transcription repressor activity | 0.955588849035129 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.801830750183111 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.3513586903977 | bayes_pls_golite062009 |
