| Protein: | FBpp0305365, Kr-PA |
| Organism: | Drosophila melanogaster |
| Length: | 502 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0305365, Kr-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
684.0 | [0..1] | [493..2374] |
|
Region A: Residues: [1-85] |
1 11 21 31 41 51
| | | | | |
1 MSISMLQDAQ TRTLAAALAG IKQEDVHLDR SMSLSPPMSA NTSATSAAAI YPAMGLQQAA 60
61 AASAFGMLSP TQLLAANRQA AAFMA
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [86-201] |
1 11 21 31 41 51
| | | | | |
1 QLPMSTLANT LFPHNPAALF GAWAAQQSLP PQGTHLHSPP ASPHSPLSTP LGSGKHPLNS 60
61 PNSTPQHHEP AKKARKLSVK KEFQTEISMS VNDMYHTSGG PISPPSSGSS PNSTHD
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [202-288] |
1 11 21 31 41 51
| | | | | |
1 GAGGNAGCVG VSKDPSRDKS FTCKICSRSF GYKHVLQNHE RTHTGEKPFE CPECHKRFTR 60
61 DHHLKTHMRL HTGEKPYHCS HCDRQFV
|
| Detection Method: | |
| Confidence: | 19.045757 |
| Match: | 1tf6A |
| Description: | Transcription factor IIIA, TFIIIA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 4.70988788192472 | bayes_pls_golite062009 |
| nucleic acid binding | 4.58713908116892 | bayes_pls_golite062009 |
| DNA binding | 4.56219307357342 | bayes_pls_golite062009 |
| transcription factor activity | 3.50954949535763 | bayes_pls_golite062009 |
| transcription repressor activity | 3.27542149084008 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 3.22082323675675 | bayes_pls_golite062009 |
| binding | 3.10743787485868 | bayes_pls_golite062009 |
| transcription activator activity | 2.19952417915035 | bayes_pls_golite062009 |
| chromatin binding | 2.18464662431232 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 1.63161912031789 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.42975942698743 | bayes_pls_golite062009 |
| transcription factor binding | 1.39608963544799 | bayes_pls_golite062009 |
| transcription corepressor activity | 1.34049786451995 | bayes_pls_golite062009 |
| protein binding | 1.00484935878505 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.77874411480713 | bayes_pls_golite062009 |
| catalytic activity | 0.245893663605433 | bayes_pls_golite062009 |
|
Region A: Residues: [289-502] |
1 11 21 31 41 51
| | | | | |
1 QVANLRRHLR VHTGERPYTC EICDGKFSDS NQLKSHMLVH NGEKPFECER CHMKFRRRHH 60
61 LMNHKCGIQS PPTPALSPAM SGDYPVAISA IAIEASTNRF AAMCATYGGS NESVDMEKAT 120
121 PEDDGPLDLS EDGASSVDGH CSNIARRKAQ DIRRVFRLPP PQIPHVPSDM PEQTEPEDLS 180
181 MHSPRSIGSH EQTDDIDLYD LDDAPASYMG HQQH
|
| Detection Method: | |
| Confidence: | 58.39794 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
