| Protein: | Sox14-PB, Sox14-... |
| Organism: | Drosophila melanogaster |
| Length: | 669 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Sox14-PB, Sox14-....
| Description | E-value | Query Range |
Subject Range |
|
|
396.0 | [0..72] | [669..4] |
|
Region A: Residues: [1-179] |
1 11 21 31 41 51
| | | | | |
1 MIAKPNQATT EPPLSLRPGT VPTVPATTPA RPATITIQRR HPAPKADSTP HTLPPFSPSP 60
61 SPASSPSPAP AQTPGAQKTQ SQAAITHPAA VASPSAPVAA AAPKTPKTPE PRSTHTHTHT 120
121 HSQHFSPPPR ESEMDGERSP SHSGHEMTLS MDGIDSSLVF GSARVPVNSS TPYSDATRT
|
| Detection Method: |  |
| Confidence: | 1.47 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
|
Region A: Residues: [180-298] |
1 11 21 31 41 51
| | | | | |
1 KKHSPGHIKR PMNAFMVWSQ MERRKICERT PDLHNAEISK ELGRRWQLLS KDDKQPYIIE 60
61 AEKLRKLHMI EYPNYKYRPQ KKQTRSPGSL KPNQDADGCE ARNDTTNNNN SLTTLAING
|
| Detection Method: | |
| Confidence: | 19.0 |
| Match: | 2gzkA |
| Description: | No description for 2gzkA was found. |
| Term | Confidence | Notes |
| DNA binding | 5.15324651287773 | bayes_pls_golite062009 |
| transcription regulator activity | 4.9607192917135 | bayes_pls_golite062009 |
| nucleic acid binding | 4.70730250099648 | bayes_pls_golite062009 |
| transcription factor activity | 3.82658263870186 | bayes_pls_golite062009 |
| binding | 3.6211482127468 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.96229555092695 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.84606709725198 | bayes_pls_golite062009 |
| transcription activator activity | 1.62744929149746 | bayes_pls_golite062009 |
| transcription repressor activity | 1.53825678633232 | bayes_pls_golite062009 |
| protein binding | 1.131658134984 | bayes_pls_golite062009 |
| transcription factor binding | 1.10315330167937 | bayes_pls_golite062009 |
| DNA bending activity | 0.87985209274756 | bayes_pls_golite062009 |
| chromatin binding | 0.830960835937769 | bayes_pls_golite062009 |
|
Region A: Residues: [299-443] |
1 11 21 31 41 51
| | | | | |
1 TTTAGRKSKR STSTCQSGSA SKRLRNDSGD TSSKPKYEVK MESAEQLNSA DIILPSADNL 60
61 ISYQSSEYLP LSTLSNADCD EKLHSELSSG PLESRENLSE VVNRFLPLFL GGNEDSQLGV 120
121 SSLTQSQHNQ SDPTAGLMDN ISDIS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [444-493] |
1 11 21 31 41 51
| | | | | |
1 PINDREELTE EVMRYLPYLE VNPSSDGLTL KVESSSLLGK PLNEPVFDSE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [494-559] |
1 11 21 31 41 51
| | | | | |
1 DNIVNDANLH SASHQIPPYV PDSHDCFAED CGGDSSSHQV EFEVVRPQTV TMTMTCTLPY 60
61 GGPDAG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [560-669] |
1 11 21 31 41 51
| | | | | |
1 HTTFQADDFN AIPSAAEDSE CSILTTSNSP QIGFNGSSFV EADAIGSTCT YAQQDYTGSV 60
61 IETHNDLNYA AHDNNGALLA YTFEDLPPQP TGSHLEFNTN KYEFASYYKM
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
