| Protein: | CG5602-PA |
| Organism: | Drosophila melanogaster |
| Length: | 747 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG5602-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
676.0 | [0..1] | [747..1] |
|
Region A: Residues: [1-64] |
1 11 21 31 41 51
| | | | | |
1 MQKSITSFFK KKSDATDSPS PPKKVPKIDA KTELPDEPHI KSESASPETK PKVEPMSVDS 60
61 EEKT
|
| Detection Method: |  |
| Confidence: | 4.09691 |
| Match: | 1uw0A |
| Description: | Solution structure of the zinc-finger domain from DNA ligase IIIa |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 1.10126761346723 | bayes_pls_golite062009 |
| binding | 1.03163529784653 | bayes_pls_golite062009 |
| nucleic acid binding | 0.83578688346684 | bayes_pls_golite062009 |
| DNA binding | 0.78991420977701 | bayes_pls_golite062009 |
| catalytic activity | 0.472235543748473 | bayes_pls_golite062009 |
| protein binding | 0.423719585823079 | bayes_pls_golite062009 |
| transcription factor activity | 0.29405007637982 | bayes_pls_golite062009 |
|
Region A: Residues: [65-747] |
1 11 21 31 41 51
| | | | | |
1 SPVKNVKKEP KEVDDKTTDK KVTTIGLNST AATKEDVENY DPSADSYHPL KNAYWKDKKV 60
61 TPYLALARTF QVIEETKGRL KMIDTLSNFF CSVMLVSPED LVPSVYLSIN QLAPAYEGLE 120
121 LGVAETTLMK AICKATGRNL AHIKSQTQLT GDLGIVAEQS RVSQRMMFQP APLNVRDVFR 180
181 KLREIAKLSG QSKMDLVYNM FVACRSSEAR FFIRSLIGKL RIGIAEQSLL TALAIGLVKK 240
241 NHIDDCKASK VPDVYKDEIV DTTLLLKTAY CQCPNYDIII PAILKYDIKE LQERCPMHPG 300
301 MPLRPMLAQP TKGVHEVFER FGGMQITCEW KYDGERAQIH RNEKGEISIF SRNSENNTAK 360
361 YPDLIARSTA LLKGDVKSYI IDSEIVAWDV ERKQILPFQV LSTRKRKNVD IEEIKVQVCV 420
421 YIFDLLYING TALVTKNLSE RRKLLLEHFQ EVEGEWKFAT ALDTNDIDEV QQFLEESIKG 480
481 NCEGLMVKTL DEEATYEIAK RSRNWLKLKK DYLSNVGDSL DLVVIGGYKG KGRRTGTYGG 540
541 FLLACYDTEN EEYQSICKIG TGFTDEDLQT HSEFLGKHVT SAAKSYYRYD PSLEPDHWFE 600
601 PVQVWEVKCA DLSLSPIHRA AIGIVDGERG ISLRFPRFIR IRDDKNSENA TDANQVAHMY 660
661 QSQDQVKNNQ KSSTQMEMED EFY
|
| Detection Method: | |
| Confidence: | 177.0 |
| Match: | 1x9nA |
| Description: | Crystal Structure of Human DNA Ligase I bound to 5'-adenylated, nicked DNA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ligase activity, forming phosphoric ester bonds | 4.3248432594553 | bayes_pls_golite062009 |
| DNA ligase activity | 4.32201730952065 | bayes_pls_golite062009 |
| DNA ligase (NAD+) activity | 3.23439045843438 | bayes_pls_golite062009 |
| catalytic activity | 2.52414801555837 | bayes_pls_golite062009 |
| ligase activity | 1.91469215096842 | bayes_pls_golite062009 |
| DNA ligase (ATP) activity | 1.83677193007569 | bayes_pls_golite062009 |
