| Protein: | Sema-2a-PB, Sema... |
| Organism: | Drosophila melanogaster |
| Length: | 724 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Sema-2a-PB, Sema....
| Description | E-value | Query Range |
Subject Range |
|
|
530.0 | [0..38] | [724..11] |
|
Region A: Residues: [1-724] |
1 11 21 31 41 51
| | | | | |
1 MSLLQLSPLL ALLLLLCSSV SETAADYENT WNFYYERPCC TGNDQGNNNY GKHGADHVRE 60
61 FNCGKLYYRT FHMNEDRDTL YVGAMDRVFR VNLQNISSSN CNRDVINLEP TRDDVVSCVS 120
121 KGKSQIFDCK NHVRVIQSMD QGDRLYVCGT NAHNPKDYVI YANLTHLPRS EYVIGVGLGI 180
181 AKCPYDPLDN STAIYVENGN PGGLPGLYSG TNAEFTKADT VIFRTDLYNT SAKRLEYKFK 240
241 RTLKYDSKWL DKPNFVGSFD IGEYVYFFFR ETAVEYINCG KAVYSRIARV CKKDVGGKNL 300
301 LAHNWATYLK ARLNCSISGE FPFYFNEIQS VYQLPSDKSR FFATFTTSTN GLIGSAVCSF 360
361 HINEIQAAFN GKFKEQSSSN SAWLPVLNSR VPEPRPGTCV NDTSNLPDTV LNFIRSHPLM 420
421 DKAVNHEHNN PVYYKRDLVF TKLVVDKIRI DILNQEYIVY YVGTNLGRIY KIVQYYRNGE 480
481 SLSKLLDIFE VAPNEAIQVM EISQTRKSLY IGTDHRIKQI DLAMCNRRYD NCFRCVRDPY 540
541 CGWDKEANTC RPYELDLLQD VANETSDICD SSVLKKKIVV TYGQSVHLGC FVKIPEVLKN 600
601 EQVTWYHHSK DKGRYEIRYS PTKYIETTER GLVVVSVNEA DGGRYDCHLG GSLLCSYNIT 660
661 VDAHRCTPPN KSNDYQKIYS DWCHEFEKYK TAMKSWEKKQ AQCSTRQNFS SNQHPNEIFR 720
721 KPNV
|
| Detection Method: |  |
| Confidence: | 101.0 |
| Match: | 1olzA |
| Description: | The ligand-binding face of the semaphorins revealed by the high resolution crystal structure of SEMA4D |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| antigen binding | 4.06466268219034 | bayes_pls_golite062009 |
| fibroblast growth factor 1 binding | 1.9185026130375 | bayes_pls_golite062009 |
| fibroblast growth factor receptor activity | 1.8360014271135 | bayes_pls_golite062009 |
| chemorepellent activity | 1.79885899802089 | bayes_pls_golite062009 |
| receptor activity | 1.73411211759611 | bayes_pls_golite062009 |
| receptor binding | 1.69538764684177 | bayes_pls_golite062009 |
| binding | 1.56912444046433 | bayes_pls_golite062009 |
| molecular transducer activity | 1.48908901984354 | bayes_pls_golite062009 |
| signal transducer activity | 1.48908901984354 | bayes_pls_golite062009 |
| axon guidance receptor activity | 1.25652075776666 | bayes_pls_golite062009 |
| protein complex binding | 1.19581190330569 | bayes_pls_golite062009 |
| transmembrane receptor activity | 1.17930092269192 | bayes_pls_golite062009 |
| fibroblast growth factor binding | 1.16887356905525 | bayes_pls_golite062009 |
| protein binding | 1.12981051950964 | bayes_pls_golite062009 |
| peptide antigen binding | 1.03871842737922 | bayes_pls_golite062009 |
| platelet-derived growth factor receptor binding | 0.68620352874827 | bayes_pls_golite062009 |
| cell adhesion molecule binding | 0.63737386998612 | bayes_pls_golite062009 |
| integrin binding | 0.32413307774101 | bayes_pls_golite062009 |
| transmembrane receptor protein tyrosine kinase activity | 0.31988469097193 | bayes_pls_golite062009 |
| viral receptor activity | 0.171304187186109 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.106172197004716 | bayes_pls_golite062009 |
| growth factor binding | 0.0783438827475496 | bayes_pls_golite062009 |
