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View Structure Prediction Details

Protein: Menl-2-PC
Organism: Drosophila melanogaster
Length: 558 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Menl-2-PC.

Description E-value Query
Range
Subject
Range
gi|1561774 - gi|1561774|gb|AAB08874.1| malate dehydrogenase [Vitis vinifera]
758.0 [0..2] [557..56]

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Predicted Domain #1
Region A:
Residues: [1-558]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFRRLHPLL RLASRPLLSS SRRFSVYDDE MEQITRPDWH VVMNGKYNKG LAFTIKERQR  60
   61 LGIMGLMPCS VRSMDDQMNA ALANFEARPT DIARFTYLSA VHHRHRRLYY RFIKENIEKS 120
  121 LPIVYTPTVG DVVATYGLNF QQAISLFISI HDKGHIRDLM HNWVDEGVKA ICVTDGGRVL 180
  181 GLGDMGANAM GISLGKMILY TALGSIPPST LMPVCLDVGT DNQALLQDPL YVGARIPRVK 240
  241 GPEYDELVDE FMESAVKCFG NNTFIHFEDF ATPNALKFLE KYQYKYCCFN DDIQGTGATG 300
  301 LAAFINVERI TGRKLEDTVF LFVGAGSAAL GIANMLAMEL EVRGIPAEEA TKNIYLMDVN 360
  361 GILTPESPNP PEMGKIFIKS MEPMKDMMAV LKKLKPSVLV GATGVGGIFN EEVLKTMAKN 420
  421 HERPAVFPLS NPTANSECTA EQAFTHTEGR VLFGSGSPFP PVVINGKRYR PAQANNCLTF 480
  481 PGIALAAITA KARYLPNEVF SVVSHELARN TPQELLDEGT LFPPIKDAHN VAFNVGVAMT 540
  541 QYLIDNGKIS LVIQTASK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1gq2A
Description: Mitochondrial NAD(P)-dependenent malic enzyme
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
malate dehydrogenase activity 8.2923573833126 bayes_pls_golite062009
malic enzyme activity 6.14953296739671 bayes_pls_golite062009
malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity 3.85693345778103 bayes_pls_golite062009
oxidoreductase activity 3.54983447672782 bayes_pls_golite062009
oxidoreductase activity, acting on CH-OH group of donors 2.66605122152932 bayes_pls_golite062009
catalytic activity 2.0643953589843 bayes_pls_golite062009
shikimate 5-dehydrogenase activity 1.82286236344978 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 1.54527841865655 bayes_pls_golite062009
alcohol dehydrogenase (NAD) activity 1.27032644348698 bayes_pls_golite062009
binding 1.21980641378611 bayes_pls_golite062009
retinol dehydrogenase activity 1.16811519855038 bayes_pls_golite062009
NAD or NADH binding 0.74536049628503 bayes_pls_golite062009
alcohol dehydrogenase activity, zinc-dependent 0.729242797855749 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 0.527946013169731 bayes_pls_golite062009
DNA binding 0.525227236870065 bayes_pls_golite062009
nucleic acid binding 0.459537641913493 bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor 0.33551402794014 bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH 0.19685680097448 bayes_pls_golite062009
transcription regulator activity 0.152651308844322 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor 0.13669372647381 bayes_pls_golite062009
glutamate dehydrogenase (NADP+) activity 0.00742771196951075 bayes_pls_golite062009

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