| Protein: | casp-PB, casp-PA |
| Organism: | Drosophila melanogaster |
| Length: | 695 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for casp-PB, casp-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
626.0 | [0..1] | [695..1] |
|
Region A: Residues: [1-75] |
1 11 21 31 41 51
| | | | | |
1 MSENKDEALT SFQSITGIDD VGEAFSHLEA ADWNLVEALS RVIPHEDAPL TSPHPILVPE 60
61 PPARNAVEST NGFRP
|
| Detection Method: |  |
| Confidence: | 1.55 |
| Match: | 2damA |
| Description: | No description for 2damA was found. |
|
Region A: Residues: [76-148] |
1 11 21 31 41 51
| | | | | |
1 PGFDEMPGTS NASGFFAAAL QNQNQNLNLN QPHIQQRFPT SQLLAQLTSS INLDPASSQN 60
61 NNQNVITFNI HFN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [149-328] |
1 11 21 31 41 51
| | | | | |
1 QQLYQLRLPS EATVEQLKRK IFAETSVPVC RQAIRGWPPS KASDAQQLGT RLCNLDLSPE 60
61 NELILVDLTE DGFMDTEQDE VTQRVDKDFT IFIQFESDPP LTLSLPGRMT VQEVKMNVFD 120
121 IKSIPVRHQE WTGWPNGCDN DTTLAQSGIG LSHRFAVRST ERSAPTNSNQ HNAFDVVTVD 180
181
|
| Detection Method: | |
| Confidence: | 19.154902 |
| Match: | 1z2mA |
| Description: | Crystal Structure of ISG15, the Interferon-Induced Ubiquitin Cross Reactive Protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 2.9188688008729 | bayes_pls_golite062009 |
| binding | 2.786655943372 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 2.06714283858345 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 1.48147454986498 | bayes_pls_golite062009 |
| transcription regulator activity | 1.42747465816672 | bayes_pls_golite062009 |
| nucleic acid binding | 1.32707653701567 | bayes_pls_golite062009 |
| DNA binding | 1.22622447288034 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 1.0818414663245 | bayes_pls_golite062009 |
| signal transducer activity | 1.05682194741929 | bayes_pls_golite062009 |
| molecular transducer activity | 1.05682194741929 | bayes_pls_golite062009 |
| hydrolase activity | 0.614233748923048 | bayes_pls_golite062009 |
| GTPase regulator activity | 0.334601927012824 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 0.315664702789604 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.209042683238025 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.162163146322721 | bayes_pls_golite062009 |
| receptor signaling protein activity | 0.119687312084129 | bayes_pls_golite062009 |
| receptor binding | 0.020939932812017 | bayes_pls_golite062009 |
|
Region A: Residues: [329-511] |
1 11 21 31 41 51
| | | | | |
1 SESSTDEFED ATDFNNAEYI FTDSPPAQPP NRHLIPNDTD DEISGSTQFV ENYKARYGEP 60
61 CPEFFVGSLE NAKQLACLRS AKERKLLAIY LHHGKSILSN VFCDQLMKHE SIIQTFKEKF 120
121 VLYGWDMTYE SNKDMFLSSL TACISSNASL TARNIKLDKL PAIMLVGKSR QLGSNCEVLS 180
181 VIH
|
| Detection Method: | |
| Confidence: | 23.522879 |
| Match: | 2dlxA |
| Description: | No description for 2dlxA was found. |
| Term | Confidence | Notes |
| transcription regulator activity | 1.51590630336241 | bayes_pls_golite062009 |
| antioxidant activity | 1.41754012367769 | bayes_pls_golite062009 |
| binding | 1.25802922431343 | bayes_pls_golite062009 |
| peroxidase activity | 1.22546563390242 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on peroxide as acceptor | 1.22546563390242 | bayes_pls_golite062009 |
| protein binding | 1.18479617596618 | bayes_pls_golite062009 |
| signal transducer activity | 1.03696928411308 | bayes_pls_golite062009 |
| molecular transducer activity | 1.03696928411308 | bayes_pls_golite062009 |
| catalytic activity | 0.672192331361968 | bayes_pls_golite062009 |
| hydrolase activity | 0.517269321619613 | bayes_pls_golite062009 |
| glutathione peroxidase activity | 0.29729802281773 | bayes_pls_golite062009 |
| intramolecular oxidoreductase activity | 0.13913802190798 | bayes_pls_golite062009 |
| peroxiredoxin activity | 0.0343881005856616 | bayes_pls_golite062009 |
|
Region A: Residues: [512-615] |
1 11 21 31 41 51
| | | | | |
1 GNIGLDDLLT RLIETCEMFE EQLQVEIRQE DERAARDQVK AEQDMAYQET LQADMAKDAA 60
61 KRQKEAAQLA ERKRMESERA EEDARRESIR LVAQQSLPQE PSEQ
|
| Detection Method: | |
| Confidence: | 6.39794 |
| Match: | 2i1jA |
| Description: | No description for 2i1jA was found. |
|
Region A: Residues: [616-695] |
1 11 21 31 41 51
| | | | | |
1 ETGTSKIRVR KPTGDFLERR FFINNNLQDL LNFVTANGFL IEEYKLISSW PRRDLTAIES 60
61 SQTLESLKLY PQETVILEER
|
| Detection Method: | |
| Confidence: | 21.69897 |
| Match: | 1h8cA |
| Description: | Fas-assosiated factor 1, Faf1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 2.9188688008729 | bayes_pls_golite062009 |
| binding | 2.786655943372 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 2.06714283858345 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 1.48147454986498 | bayes_pls_golite062009 |
| transcription regulator activity | 1.42747465816672 | bayes_pls_golite062009 |
| nucleic acid binding | 1.32707653701567 | bayes_pls_golite062009 |
| DNA binding | 1.22622447288034 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 1.0818414663245 | bayes_pls_golite062009 |
| signal transducer activity | 1.05682194741929 | bayes_pls_golite062009 |
| molecular transducer activity | 1.05682194741929 | bayes_pls_golite062009 |
| hydrolase activity | 0.614233748923048 | bayes_pls_golite062009 |
| GTPase regulator activity | 0.334601927012824 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 0.315664702789604 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.209042683238025 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.162163146322721 | bayes_pls_golite062009 |
| receptor signaling protein activity | 0.119687312084129 | bayes_pls_golite062009 |
| receptor binding | 0.020939932812017 | bayes_pls_golite062009 |
