| Protein: | FBpp0086882, lat-PA |
| Organism: | Drosophila melanogaster |
| Length: | 721 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0086882, lat-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
854.0 | [0..1] | [721..1] |
|
Region A: Residues: [1-515] |
1 11 21 31 41 51
| | | | | |
1 MDPTISVSKG CFVYKNGATR AGKKAASKRK RPAAESSSLL GKEVVQQPFY EEYRKAWNQI 60
61 NDHIADLQHR SYARTLEQLV DFVVGQAERD TPDEVLPTAA LLTGINQPDH LSQFTALTQR 120
121 LHAQRAAMVC VLQSRDCATL KAAVETLVFG LVEDNAEVEQ MEDEDEDEDG AERDRKRLRR 180
181 SQCTMKQLKS WYTNNFDSEQ KRRQLVVILP DFECFNASVL QDLILILSAH CGSLPFVLVL 240
241 GVATAMTAVH GTLPYHVSSK IRLRVFQTQA APTGLNEVLD KVLLSPKYAF HLSGKTFKFL 300
301 THIFLYYDFS IHGFIQGFKY CLMEHFFGGN AFALCTDYSK ALGRIKQLTH EDMETIRRLP 360
361 SFRPYVEQIN DCKRIIAVLT DDDYLKKKLP QLLRDCLLHF LLFRCSLEFL TELVGDLPRC 420
421 PLGKLRRELY VNCLNRAIIS TPEYKECLQM LSFLSKDEFV AKVNRALERT EQFLVEEIAP 480
481 LELGEACTAV LRPKLEAIRL AVDEVVKATM ATITT
|
| Detection Method: |  |
| Confidence: | 1.02 |
| Match: | 1fnnA |
| Description: | CDC6, C-terminal domain; CDC6, N-domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA clamp loader activity | 3.02220304275406 | bayes_pls_golite062009 |
| protein-DNA loading ATPase activity | 2.98512761739082 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 2.51056345830226 | bayes_pls_golite062009 |
| DNA helicase activity | 2.07805757910215 | bayes_pls_golite062009 |
| binding | 1.98872728862535 | bayes_pls_golite062009 |
| pyrophosphatase activity | 1.86107760494079 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 1.67733655597151 | bayes_pls_golite062009 |
| DNA replication origin binding | 1.51095871692451 | bayes_pls_golite062009 |
| helicase activity | 1.47239452959713 | bayes_pls_golite062009 |
| nucleic acid binding | 1.46809935501802 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 0.962068859908115 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 0.962068859908115 | bayes_pls_golite062009 |
| DNA binding | 0.959585045949425 | bayes_pls_golite062009 |
| catalytic activity | 0.942640875796745 | bayes_pls_golite062009 |
| DNA-directed DNA polymerase activity | 0.902971700296229 | bayes_pls_golite062009 |
| DNA polymerase activity | 0.863214173324181 | bayes_pls_golite062009 |
| transcription regulator activity | 0.779711797772654 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.697536582328083 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.481409758059649 | bayes_pls_golite062009 |
| motor activity | 0.412856426548665 | bayes_pls_golite062009 |
| protein binding | 0.182543549489122 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.0988428757344488 | bayes_pls_golite062009 |
|
Region A: Residues: [516-721] |
1 11 21 31 41 51
| | | | | |
1 TSPNETRQAT DHLTPVASRQ ELKDQLLQRS KEDKMRHQLN TPTTQFGRAL QKTLQLIETQ 60
61 IVQDHLRALQ DAPPIHELFV FSDIATVRRN IIGAPRAALH TALNNPHFYM QCKCCELQDQ 120
121 SLLVGTLPDL SVVYKLHLEC GRMINLFDWL QAFRSVVSDS DHEEVAQEQI DPQIQARFTR 180
181 AVAELQFLGY IKMSKRKTDH ATRLTW
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
