| Protein: | Mat1-PA |
| Organism: | Drosophila melanogaster |
| Length: | 320 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Mat1-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
222.0 | [0..1] | [320..1] |
|
Region A: Residues: [1-63] |
1 11 21 31 41 51
| | | | | |
1 MDDQACPRCK TTKYRNPSLK LMVNVCGHTL CESCVDLLFL KGSGACPECM VPLRRNNFRV 60
61 QLF
|
| Detection Method: |  |
| Confidence: | 12.69897 |
| Match: | 1g25A |
| Description: | TFIIH Mat1 subunit |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| general RNA polymerase II transcription factor activity | 6.51043144330453 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 3.14238164427954 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 3.12673603940339 | bayes_pls_golite062009 |
| binding | 2.78710909602478 | bayes_pls_golite062009 |
| transcription regulator activity | 2.72498741013971 | bayes_pls_golite062009 |
| protein binding | 2.64803540957326 | bayes_pls_golite062009 |
| nucleic acid binding | 2.32387297115017 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 2.10988747259202 | bayes_pls_golite062009 |
| DNA binding | 2.00904221080834 | bayes_pls_golite062009 |
| transcription activator activity | 1.45530270292081 | bayes_pls_golite062009 |
| transcription factor activity | 1.22579085356684 | bayes_pls_golite062009 |
| transcription factor binding | 1.11842175076436 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.926364718530146 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.90321253993065 | bayes_pls_golite062009 |
| hydrolase activity | 0.52386813728704 | bayes_pls_golite062009 |
| transcription repressor activity | 0.350170315296021 | bayes_pls_golite062009 |
| ligase activity | 0.34187399168736 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.255669498391574 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.233838999434784 | bayes_pls_golite062009 |
| catalytic activity | 0.14112008370434 | bayes_pls_golite062009 |
| enzyme binding | 0.104373352314595 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 0.024993043379745 | bayes_pls_golite062009 |
|
Region A: Residues: [64-320] |
1 11 21 31 41 51
| | | | | |
1 EDPMVEKEVD IRRRILRDYN KREEDFASLA EYNDYLEEIE DIVYNLCNNI DIIETNKRIE 60
61 AYKRDNREVI QRNKTRVGRD EYALEEMLEL EKVQEEARRK ELEELENEHK KKKARDKQAL 120
121 IEELMYSGKD AAQIVTEFAE KAEKQREEEK QLPPPKPANE FSTGIKFGQT ADPSLLPVPK 180
181 SEEGPLFVYE PLVPFSEGPA MPPTNEIVSR GYIAHIRAET PQENAGGFTS ALACERALQE 240
241 ALQGLYYTAT TGVVSGT
|
| Detection Method: | |
| Confidence: | 4.154902 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
