| Protein: | Pka-R2-PB, Pka-R2-PA |
| Organism: | Drosophila melanogaster |
| Length: | 377 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Pka-R2-PB, Pka-R2-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
265.0 | [0..1] | [377..1] |
|
Region A: Residues: [1-71] |
1 11 21 31 41 51
| | | | | |
1 MSSDSSRRIQ VPEELKEVLL QFSISFLVEQ PPDVIDYAVE YFTKLQSERP SVSHTDQSTD 60
61 DQLSVNSQDA D
|
| Detection Method: |  |
| Confidence: | 3.18 |
| Match: | 2izyA |
| Description: | No description for 2izyA was found. |
|
Region A: Residues: [72-377] |
1 11 21 31 41 51
| | | | | |
1 AEPPVMASSR RKSVFAEAYD PEADDDDDGA TAVFPKTDEQ RARLVESVKN VLLFRSLEKE 60
61 QMNQVLDAMF ERKVQPGDFI IRQGDDGDNF YVIESGVYKV YINDKHINTY NHTGLFGELA 120
121 LLYNMPRAAT VQAETSGLLW AMDRQTFRRI LLKSAFRKRK MYEELLNSVP MLKALQNYER 180
181 MNLADALVSK SYDNGERIIK QGDAADGMYF IEEGTVSVRM DQDDAEVEIS QLGKGQYFGE 240
241 LALVTHRPRA ASVYATGGVV KLAFLDVKAF ERLLGPCMDI MKRNIDDYES QLVKIFGSKN 300
301 NITDTR
|
| Detection Method: | |
| Confidence: | 51.0 |
| Match: | 1cx4A |
| Description: | Regulatory subunit of Protein kinase A |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| gated channel activity | 3.75615867846417 | bayes_pls_golite062009 |
| ligand-gated ion channel activity | 3.71111882888041 | bayes_pls_golite062009 |
| ligand-gated channel activity | 3.71111882888041 | bayes_pls_golite062009 |
| cation channel activity | 3.61025292543387 | bayes_pls_golite062009 |
| ion channel activity | 3.49583875363169 | bayes_pls_golite062009 |
| substrate-specific channel activity | 2.99565487349638 | bayes_pls_golite062009 |
| transporter activity | 2.8998330876169 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.85192191539872 | bayes_pls_golite062009 |
| cAMP-dependent protein kinase regulator activity | 2.78017841119787 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.66890994787635 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 2.66781824266082 | bayes_pls_golite062009 |
| channel activity | 2.66781824266082 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 2.64973131242976 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.62037413430064 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 2.28218867890883 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 2.24699267672716 | bayes_pls_golite062009 |
| transcription regulator activity | 1.97137082688083 | bayes_pls_golite062009 |
| binding | 1.80151718402565 | bayes_pls_golite062009 |
| intracellular ligand-gated ion channel activity | 1.68618484766279 | bayes_pls_golite062009 |
| nucleic acid binding | 1.62633054482127 | bayes_pls_golite062009 |
| DNA binding | 1.54942974151543 | bayes_pls_golite062009 |
| enzyme regulator activity | 1.40720858109605 | bayes_pls_golite062009 |
| molecular transducer activity | 1.29733029674587 | bayes_pls_golite062009 |
| signal transducer activity | 1.29733029674587 | bayes_pls_golite062009 |
| cyclic nucleotide-gated ion channel activity | 1.26984296847489 | bayes_pls_golite062009 |
| intracellular cyclic nucleotide activated cation channel activity | 1.26984296847489 | bayes_pls_golite062009 |
| transcription factor activity | 1.14697837766975 | bayes_pls_golite062009 |
| kinase regulator activity | 0.944734749939467 | bayes_pls_golite062009 |
| GTPase regulator activity | 0.930640481652164 | bayes_pls_golite062009 |
| protein kinase regulator activity | 0.921648634540942 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 0.910527807644534 | bayes_pls_golite062009 |
| guanyl-nucleotide exchange factor activity | 0.848189810874263 | bayes_pls_golite062009 |
| protein binding | 0.81302068072988 | bayes_pls_golite062009 |
| nucleotide binding | 0.274529576258456 | bayes_pls_golite062009 |
| voltage-gated ion channel activity | 0.26553997342843 | bayes_pls_golite062009 |
| voltage-gated channel activity | 0.26063388960068 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.0296966221249605 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.0295376254112757 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.025744194913981 | bayes_pls_golite062009 |
