| Protein: | gi|125559330 |
| Organism: | Oryza sativa Indica Group |
| Length: | 253 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125559330.
| Description | E-value | Query Range |
Subject Range |
|
|
175.0 | [0..10] | [251..18] |
|
Region A: Residues: [1-253] |
1 11 21 31 41 51
| | | | | |
1 MTALACLAGK AISWSSGVKA AAGCGLGLLP QWRGVFRSVR MESGSSQGGR GALIVLEGLD 60
61 RSGKSSQCAR LLSFLQGKGC QAEGWRFPDR GTSVGQMISA YLANESELDD RTIHLLFSAN 120
121 RWEKRALMER KLLGGTTLIV DRYSYSGVAF SAAKGLDIEW CKAPENGLIA PDLVVYLDVQ 180
181 PEKAAERGGY GGERYEKIEF QKKVGEHYHS LRDSTWKVVD GSLPMEVVEE QLKELAMSCI 240
241 LECQSKQLAS LAW
|
| Detection Method: |  |
| Confidence: | 38.30103 |
| Match: | 1e9fA |
| Description: | Thymidylate kinase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| hydrogen ion transporting ATP synthase activity, rotational mechanism | 3.01286198424677 | bayes_pls_golite062009 |
| hydrogen ion transmembrane transporter activity | 2.06460241490722 | bayes_pls_golite062009 |
| binding | 2.05253348982328 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.0114051513686 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 1.92626167278464 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 1.9136419736217 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 1.6854386921174 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 1.64467072658718 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.5008821138859 | bayes_pls_golite062009 |
| nucleic acid binding | 1.49633029954726 | bayes_pls_golite062009 |
| pyrophosphatase activity | 1.49611313354225 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 1.2155186842031 | bayes_pls_golite062009 |
| helicase activity | 1.16085745407703 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| DNA binding | 0.967303417236485 | bayes_pls_golite062009 |
| transcription regulator activity | 0.748437190903548 | bayes_pls_golite062009 |
| DNA helicase activity | 0.72881469450553 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.720649395550746 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 0.59513742813869 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 0.59513742813869 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.58862275163252 | bayes_pls_golite062009 |
| CTP synthase activity | 0.435702031552231 | bayes_pls_golite062009 |
| protein-DNA loading ATPase activity | 0.3625050107782 | bayes_pls_golite062009 |
| DNA clamp loader activity | 0.27925703205288 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 0.22150712609541 | bayes_pls_golite062009 |
| protein binding | 0.193768631623192 | bayes_pls_golite062009 |
| nucleobase, nucleoside, nucleotide kinase activity | 0.12351419478929 | bayes_pls_golite062009 |
| nucleotide binding | 0.114848452385726 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.10713474095071 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.0916519414118148 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.0915913646217636 | bayes_pls_golite062009 |
| DNA polymerase activity | 4.95561462330096E-4 | bayes_pls_golite062009 |
