| Protein: | SYC_SCHPO |
| Organism: | Schizosaccharomyces pombe 972h- |
| Length: | 754 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SYC_SCHPO.
| Description | E-value | Query Range |
Subject Range |
|
|
404.0 | [0..5] | [751..95] |
|
|
393.0 | [0..5] | [751..95] |
|
|
390.0 | [0..5] | [751..95] |
|
|
390.0 | [0..8] | [751..98] |
|
|
389.0 | [0..5] | [751..95] |
|
|
388.0 | [0..5] | [751..95] |
|
Region A: Residues: [1-112] |
1 11 21 31 41 51
| | | | | |
1 MSTRNPAQSH WGVPKGQRTE LYVYNTLTHS KVPFVSNGSN LTWYCCGPTV YDASHMGHAR 60
61 NYVTTDILRR ILQSYFGYNI TFVQNVTDID DKIILRARQQ YLFEEYKKQQ GT
|
| Detection Method: |  |
| Confidence: | 5.045757 |
| Match: | 1iq0A |
| Description: | Arginyl-tRNA synthetase (ArgRS); Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [113-636] |
1 11 21 31 41 51
| | | | | |
1 NKSHSEAREK VTEAWFAYAK KNLPEPPSSM SEWPQWLASH DIPTLAINNP KLPMHVDALK 60
61 SALDALQVSE ASEIISLDGF WPKVQDVLVP LLDAELGSTV TDPAIFRKLA AYWEDDFNKD 120
121 MANLNVLPPT AVTRVSEYVP EIVDFVQRII DRGYAYPVTD GSVYFDTEAF EKGGHFYAKL 180
181 EPWNKGNREL IAEGEGSLAA LTGKKRPGDF ALWKASKPGE PSWDSPWSKG RPGWHIECSV 240
241 MASALLGSNI DIHSGGIDLA FPHHDNELAQ SEAYFDCPQW VNYFFHAGHL HIEGQKMSKS 300
301 LKNFITIKEI LKKFTPRQLR LAFLLQQWNT QLDFKETLLA YVLNIEQALE NFFRTVRALM 360
361 NETEGVSANG GHVPEKFDKL EIELLEKFQQ TQQNTHLALC DSFNTPLVMQ HIDNLVTQAN 420
421 IYIREVGQQP CSRLLGQIAS WITSMLQIFG LDENGHPNAV GWSSSKGSSS ENTDAMPYIR 480
481 AVSSFRDRVR ELCIAKASSQ EILKACDIFR DYDMAALGVS FNDR
|
| Detection Method: | |
| Confidence: | 68.09691 |
| Match: | 1li5A |
| Description: | Cysteinyl-tRNA synthetase (CysRS) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ligase activity, forming aminoacyl-tRNA and related compounds | 7.16276509815667 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 7.16276509815667 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 7.13957775963187 | bayes_pls_golite062009 |
| ligase activity | 6.11211476973434 | bayes_pls_golite062009 |
| cysteine-tRNA ligase activity | 5.23703961447809 | bayes_pls_golite062009 |
| isoleucine-tRNA ligase activity | 3.76808520367507 | bayes_pls_golite062009 |
| glutamate-tRNA ligase activity | 2.63681738794687 | bayes_pls_golite062009 |
| catalytic activity | 2.37674226834122 | bayes_pls_golite062009 |
| methionine-tRNA ligase activity | 2.01261843164558 | bayes_pls_golite062009 |
| tyrosine-tRNA ligase activity | 1.88984817882585 | bayes_pls_golite062009 |
| tryptophan-tRNA ligase activity | 1.14187887833901 | bayes_pls_golite062009 |
| arginine-tRNA ligase activity | 1.13743634264647 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.89131347796645 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.625793556381714 | bayes_pls_golite062009 |
| nucleic acid binding | 0.369886886936128 | bayes_pls_golite062009 |
| RNA binding | 0.306683553109855 | bayes_pls_golite062009 |
| glutamine-tRNA ligase activity | 0.118292082006187 | bayes_pls_golite062009 |
| binding | 0.090743795600025 | bayes_pls_golite062009 |
|
Region A: Residues: [637-754] |
1 11 21 31 41 51
| | | | | |
1 PQGSALVKLV DAEELIAARE QKLEEERAKQ AKKAQAKAEQ EKKQVERVMK GKTSPSEMFK 60
61 MFKEYLSFDE AGLPTKMRGE DGSEIDVPKS RKKKLQKEYA QQEKLHKEYL SYIESNKS
|
| Detection Method: | |
| Confidence: | 4.0 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
