| Protein: | PNK1_SCHPO |
| Organism: | Schizosaccharomyces pombe 972h- |
| Length: | 421 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PNK1_SCHPO.
| Description | E-value | Query Range |
Subject Range |
|
|
279.0 | [0..11] | [420..107] |
|
|
277.0 | [0..11] | [420..107] |
|
|
267.0 | [0..11] | [420..107] |
|
|
266.0 | [0..11] | [406..107] |
|
|
262.0 | [0..11] | [406..42] |
|
Region A: Residues: [1-421] |
1 11 21 31 41 51
| | | | | |
1 MSSKKRKSPP QESLTSYFEK SSKSSKKYGS QNKDSDSSST CLQQKIEIQW SITDSLYIAK 60
61 YGKLKKTKKF IAFDLDGTLI KTKSGRVFSK DAADWTWWHP SVVPKLKALY QDNYSLVIFS 120
121 NQNGIPRKPS AGHTFQMKIR AIFESLDLPI VLYAAILKDK FRKPLTGMWN SFLKDVNRSI 180
181 DLSFIKYVGD AAGRPGDHNS TDLKFAENIG IKFETPEQFF LGHSFVPPNF ESFHPKNYLV 240
241 RNSSSHPYHF KKSEHQEIVV LVGFPSSGKS TLAESQIVTQ GYERVNQDIL KTKSKCIKAA 300
301 IEALKKEKSV VIGMYSIIST TYAISDNTNP TIESRKMWID IAQEFEIPIR CIHLQSSEEL 360
361 ARHNNVFRYI HHNQKQLPEI AFNSFKSRFQ MPTVEEGFTN VEEVPFKCLK DYEDTWNYWY 420
421 E
|
| Detection Method: |  |
| Confidence: | 66.09691 |
| Match: | 1yj5A |
| Description: | Molecular architecture of mammalian polynucleotide kinase, a DNA repair enzyme |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| hydrolase activity | 2.8454129466116 | bayes_pls_golite062009 |
| catalytic activity | 1.55296860681783 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 1.35602953485803 | bayes_pls_golite062009 |
| ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity | 1.11898265155482 | bayes_pls_golite062009 |
| polynucleotide kinase activity | 1.11898265155482 | bayes_pls_golite062009 |
| polydeoxyribonucleotide kinase activity | 1.11898265155482 | bayes_pls_golite062009 |
| ATP-dependent polynucleotide kinase activity | 1.11898265155482 | bayes_pls_golite062009 |
| binding | 0.89911057995199 | bayes_pls_golite062009 |
| nucleic acid binding | 0.622587075720369 | bayes_pls_golite062009 |
| DNA binding | 0.452491037562571 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.35576808478553 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.317638328626539 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.289666831374877 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.267902691361304 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.267204331913108 | bayes_pls_golite062009 |
| ATPase activity | 0.19237422649759 | bayes_pls_golite062009 |
