| Protein: | SPF30_MOUSE |
| Organism: | Mus musculus |
| Length: | 238 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPF30_MOUSE.
| Description | E-value | Query Range |
Subject Range |
|
|
252.0 | [0..1] | [238..1] |
|
|
248.0 | [0..1] | [238..1] |
|
|
244.0 | [0..1] | [238..1] |
|
|
244.0 | [0..1] | [238..1] |
|
|
243.0 | [0..1] | [238..1] |
|
|
242.0 | [0..1] | [238..1] |
|
|
241.0 | [0..1] | [229..299] |
|
|
233.0 | [0..1] | [238..1] |
|
Region A: Residues: [1-158] |
1 11 21 31 41 51
| | | | | |
1 MSEDLAKQLA SYKAQLQQVE AALSGNGENE DLLKLKKDLQ EVIELTKDLL STQPSETLAS 60
61 SDSFASTQPT HSWKVGDKCM AVWSEDGQCY EAEIEEIDEE NGTAAITFAV YGNAEVTPLL 120
121 NLKPVEEGRK AKEDSGNKPM SKKEMIAQQR EYKKKKAL
|
| Detection Method: |  |
| Confidence: | 27.69897 |
| Match: | 2hqeA |
| Description: | No description for 2hqeA was found. |
| Term | Confidence | Notes |
| transcription regulator activity | 3.08306835796752 | bayes_pls_golite062009 |
| binding | 3.03932294945523 | bayes_pls_golite062009 |
| protein binding | 2.81959915474598 | bayes_pls_golite062009 |
| nucleic acid binding | 2.39870293911569 | bayes_pls_golite062009 |
| DNA binding | 2.20609628916256 | bayes_pls_golite062009 |
| transcription repressor activity | 1.54356011397295 | bayes_pls_golite062009 |
| transcription factor activity | 1.48392797294737 | bayes_pls_golite062009 |
| transcription factor binding | 1.47472377622426 | bayes_pls_golite062009 |
| transcription cofactor activity | 1.30540808654443 | bayes_pls_golite062009 |
| chromatin binding | 0.86899475761353 | bayes_pls_golite062009 |
| N-methyltransferase activity | 0.53946303154276 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.30405575160278 | bayes_pls_golite062009 |
| S-adenosylmethionine-dependent methyltransferase activity | 0.223495463070134 | bayes_pls_golite062009 |
| transcription activator activity | 0.181941750923533 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.141502107934206 | bayes_pls_golite062009 |
| histone methyltransferase activity | 0.0975466265461999 | bayes_pls_golite062009 |
|
Region A: Residues: [159-238] |
1 11 21 31 41 51
| | | | | |
1 KKAQRIKELE QEREDQKVKW QQFNNRAYSK NKKGQVKRSI FASPESVTGK VGVGTCGIAD 60
61 KPMTQYQDTS KYNVRHLMPQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
