| Protein: | EIF3M |
| Organism: | Homo sapiens |
| Length: | 374 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EIF3M.
| Description | E-value | Query Range |
Subject Range |
|
|
3.0E-82 | [1..374] | [78..451] |
|
|
1.0E-77 | [1..374] | [1..374] |
|
|
1.0E-77 | [1..374] | [1..374] |
|
|
1.0E-77 | [1..374] | [1..374] |
|
|
2.0E-77 | [1..374] | [1..374] |
|
|
6.0E-77 | [1..374] | [1..374] |
|
|
2.0E-76 | [1..374] | [1..386] |
|
|
8.0E-75 | [1..373] | [1..373] |
|
Region A: Residues: [1-153] |
1 11 21 31 41 51
| | | | | |
1 MSVPAFIDIS EEDQAAELRA YLKSKGAEIS EENSEGGLHV DLAQIIEACD VCLKEDDKDV 60
61 ESVMNSVVSL LLILEPDKQE ALIESLCEKL VKFREGERPS LRLQLLSNLF HGMDKNTPVR 120
121 YTVYCSLIKV AASCGAIQYI PTELDQVRKW ISD
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [154-268] |
1 11 21 31 41 51
| | | | | |
1 WNLTTEKKHT LLRLLYEALV DCKKSDAASK VMVELLGSYT EDNASQARVD AHRCIVRALK 60
61 DPNAFLFDHL LTLKPVKFLE GELIHDLLTI FVSAKLASYV KFYQNNKDFI DSLGL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [269-374] |
1 11 21 31 41 51
| | | | | |
1 LHEQNMAKMR LLTFMGMAVE NKEISFDTMQ QELQIGADDV EAFVIDAVRT KMVYCKIDQT 60
61 QRKVVVSHST HRTFGKQQWQ QLYDTLNAWK QNLNKVKNSL LSLSDT
|
| Detection Method: | |
| Confidence: | 8.69897 |
| Match: | 1ufmA |
| Description: | Solution structure of the PCI domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 4.20828497061591 | bayes_pls_golite062009 |
| nucleic acid binding | 3.97631536825798 | bayes_pls_golite062009 |
| DNA binding | 3.93431504495991 | bayes_pls_golite062009 |
| binding | 3.38086362981788 | bayes_pls_golite062009 |
| transcription factor activity | 3.2482889289815 | bayes_pls_golite062009 |
| structural constituent of ribosome | 2.95301685898669 | bayes_pls_golite062009 |
| structural molecule activity | 2.70976099158766 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.8401324043677 | bayes_pls_golite062009 |
| transcription activator activity | 1.69071209162619 | bayes_pls_golite062009 |
| transcription repressor activity | 1.54960543048317 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.0361110104194 | bayes_pls_golite062009 |
| protein binding | 0.776629952382685 | bayes_pls_golite062009 |
| RNA binding | 0.345456982950223 | bayes_pls_golite062009 |
| transcription factor binding | 0.13558561552621 | bayes_pls_golite062009 |
