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View Structure Prediction Details

Protein: LPL
Organism: Homo sapiens
Length: 475 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LPL.

Description E-value Query
Range
Subject
Range
gi|114619064 - gi|114619064|ref|XP_001149804.1| PREDICTED: hypothetical protein isoform 3 [Pan troglodytes]
0.0 [1..475] [1..475]
gi|61371188, gi|... - gi|61371188|gb|AAX43625.1| lipoprotein lipase [synthetic construct], gi|61371183|gb|AAX43624.1| lipo...
0.0 [1..475] [1..475]
gi|62896487 - gi|62896487|dbj|BAD96184.1| lipoprotein lipase precursor variant [Homo sapiens]
0.0 [1..475] [1..475]
LIPL_NEOVI - Lipoprotein lipase OS=Neovison vison GN=LPL PE=1 SV=1
LIPL_MUSVI - Lipoprotein lipase precursor (EC 3.1.1.34) (LPL) - Mustela vison (American mink)
0.0 [1..475] [1..475]
LIPL_RAT - Lipoprotein lipase OS=Rattus norvegicus GN=Lpl PE=1 SV=1
0.0 [1..475] [1..474]
LIPL_PAPAN - Lipoprotein lipase OS=Papio anubis GN=LPL PE=2 SV=1
gi|1363926 - gi|1363926|pir||JC4242 lipoprotein lipase (EC 3.1.1.34) precursor - baboon
0.0 [1..475] [1..475]
gi|47500314 - gi|47500314|gb|AAT29038.1| lipoprotein lipase [Sus scrofa]
0.0 [1..475] [1..478]

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Predicted Domain #1
Region A:
Residues: [1-475]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESKALLVLT LAVWLQSLTA SRGGVAAADQ RRDFIDIESK FALRTPEDTA EDTCHLIPGV  60
   61 AESVATCHFN HSSKTFMVIH GWTVTGMYES WVPKLVAALY KREPDSNVIV VDWLSRAQEH 120
  121 YPVSAGYTKL VGQDVARFIN WMEEEFNYPL DNVHLLGYSL GAHAAGIAGS LTNKKVNRIT 180
  181 GLDPAGPNFE YAEAPSRLSP DDADFVDVLH TFTRGSPGRS IGIQKPVGHV DIYPNGGTFQ 240
  241 PGCNIGEAIR VIAERGLGDV DQLVKCSHER SIHLFIDSLL NEENPSKAYR CSSKEAFEKG 300
  301 LCLSCRKNRC NNLGYEINKV RAKRSSKMYL KTRSQMPYKV FHYQVKIHFS GTESETHTNQ 360
  361 AFEISLYGTV AESENIPFTL PEVSTNKTYS FLIYTEVDIG ELLMLKLKWK SDSYFSWSDW 420
  421 WSSPGFAIQK IRVKAGETQK KVIFCSREKV SHLQKGKAPA VFVKCHDKSL NKKSG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 126.0
Match: 1lpaB
Description: Pancreatic lipase, C-terminal domain; Pancreatic lipase, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
galactolipase activity 6.70989838821015 bayes_pls_golite062009
palmitoyl-(protein) hydrolase activity 2.97710910044295 bayes_pls_golite062009
phospholipase A1 activity 2.92902750888377 bayes_pls_golite062009
triglyceride lipase activity 2.74157075059569 bayes_pls_golite062009
carboxylesterase activity 2.10340684157921 bayes_pls_golite062009
lipoprotein lipase activity 2.06238979998893 bayes_pls_golite062009
triglyceride binding 2.05443583869411 bayes_pls_golite062009
phospholipase activity 1.98964694567462 bayes_pls_golite062009
lipase activity 1.95656432876646 bayes_pls_golite062009
hydrolase activity 1.89798820741335 bayes_pls_golite062009
catalytic activity 1.39629727416851 bayes_pls_golite062009
lipoprotein binding 1.26154264842601 bayes_pls_golite062009
sterol esterase activity 1.21262745914703 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.985235528680562 bayes_pls_golite062009
peptidase activity 0.946698616106528 bayes_pls_golite062009
protein binding 0.890384359682543 bayes_pls_golite062009
receptor binding 0.845720597560984 bayes_pls_golite062009
low-density lipoprotein binding 0.82178237111335 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 0.786172015267385 bayes_pls_golite062009
binding 0.549512873906854 bayes_pls_golite062009
serine hydrolase activity 0.527527404338 bayes_pls_golite062009
acylglycerol lipase activity 0.345658974420231 bayes_pls_golite062009
serine-type peptidase activity 0.33062249657108 bayes_pls_golite062009
palmitoyl-CoA hydrolase activity 0.22473838560275 bayes_pls_golite062009
carboxypeptidase activity 0.0617488967154094 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle