| Protein: | gi|115448325, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 377 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115448325, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
378.0 | [0..124] | [377..1] |
|
Region A: Residues: [1-163] |
1 11 21 31 41 51
| | | | | |
1 MRADRAELRE LKPPYPLSAP GLPLLDPTIC PRHASSRASR LACVRARRAA PSFWSLAPRY 60
61 FPLVPNPESA SASVLALLLW YLCSRLLCLA TLLPPPHCLL PWFGSFCSWV DAGCVRACVR 120
121 AEAMSSAVDA ISCSKGIAAP PTEEATKERV AVVGKNGGVE HGG
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [164-377] |
1 11 21 31 41 51
| | | | | |
1 DAATMNGKQC GEAPHCRKES NEEEEDDEEK APKAIDLGPR VSIKDQLEKD KDDESLRRWK 60
61 EQLLGSVDLN SVGETLEPDV KIMSLAILSP GRPDIFLPLP VEPNAKGVWF TLKEGSLYKL 120
121 KFTFSVSNNI VSGLRYTNAV WKTGIKVDSH KEMLGTFSPQ PEPYTYVTPE ETTPSGMFAR 180
181 GSYSARTKFL DDDRKCYLEI NYTFDIRREW PALS
|
| Detection Method: | |
| Confidence: | 89.522879 |
| Match: | 1doaB |
| Description: | Rho GDP-dissociation inhibitor 1, RhoGDI |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| actin binding | 4.21900602727099 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 3.82728537491772 | bayes_pls_golite062009 |
| binding | 2.65544526722793 | bayes_pls_golite062009 |
| Rho GDP-dissociation inhibitor activity | 1.67374100547551 | bayes_pls_golite062009 |
| actin filament binding | 1.67203076960313 | bayes_pls_golite062009 |
| small GTPase regulator activity | 1.55727555528218 | bayes_pls_golite062009 |
| protein binding | 1.50286160643298 | bayes_pls_golite062009 |
| GTPase regulator activity | 1.44225801859996 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 1.42486878565247 | bayes_pls_golite062009 |
| clathrin binding | 1.23902179002817 | bayes_pls_golite062009 |
| enzyme regulator activity | 1.05880190577068 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.929966017205863 | bayes_pls_golite062009 |
| potassium channel activity | 0.871728492941793 | bayes_pls_golite062009 |
| voltage-gated cation channel activity | 0.848303301157398 | bayes_pls_golite062009 |
| voltage-gated ion channel activity | 0.829939555243379 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.829140804686535 | bayes_pls_golite062009 |
| voltage-gated channel activity | 0.820413268771765 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 0.796075411518814 | bayes_pls_golite062009 |
| channel activity | 0.796075411518814 | bayes_pls_golite062009 |
| substrate-specific channel activity | 0.790863065462458 | bayes_pls_golite062009 |
| voltage-gated potassium channel activity | 0.787347074261486 | bayes_pls_golite062009 |
| cation channel activity | 0.770955130885998 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.760234877475175 | bayes_pls_golite062009 |
| ion channel activity | 0.743051345681968 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 0.735623329949285 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.698762820554681 | bayes_pls_golite062009 |
| gated channel activity | 0.62499749903999 | bayes_pls_golite062009 |
| GDP-dissociation inhibitor activity | 0.580608094701522 | bayes_pls_golite062009 |
| inward rectifier potassium channel activity | 0.43450134854604 | bayes_pls_golite062009 |
| ligand-gated channel activity | 0.302082279531376 | bayes_pls_golite062009 |
| ligand-gated ion channel activity | 0.302082279531376 | bayes_pls_golite062009 |
