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View Structure Prediction Details

Protein: HADHB
Organism: Homo sapiens
Length: 474 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HADHB.

Description E-value Query
Range
Subject
Range
gi|123998591, gi... - gi|123998591|gb|ABM86897.1| hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoy...
ECHB_PANTR - Trifunctional enzyme subunit beta, mitochondrial OS=Pan troglodytes GN=HADHB PE=2 SV=1
HADHB - hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), b...
gi|56342342|dbj|... - hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase, beta...
2.0E-92 [2..474] [3..475]
ECHB_BOVIN - Trifunctional enzyme subunit beta, mitochondrial OS=Bos taurus GN=HADHB PE=2 SV=1
3.0E-92 [1..474] [2..475]
gi|15778991 - gi|15778991|gb|AAH14572.1| Hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl...
7.0E-92 [2..474] [3..475]
gi|73979871 - gi|73979871|ref|XP_849696.1| PREDICTED: similar to Trifunctional enzyme beta subunit, mitochondrial ...
1.0E-91 [2..474] [3..475]
gi|55716066 - gb|AAH85980.1| Unknown (protein for MGC:97970) [Xenopus laevis]
ECHB_MOUSE - Trifunctional enzyme subunit beta, mitochondrial OS=Mus musculus GN=Hadhb PE=1 SV=1
3.0E-91 [2..474] [3..475]
ECHB_RAT - Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus GN=Hadhb PE=1 SV=1
7.0E-91 [2..474] [3..475]
ECHB_MACFA - Trifunctional enzyme subunit beta, mitochondrial OS=Macaca fascicularis GN=HADHB PE=2 SV=1
8.0E-91 [2..474] [3..475]

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Predicted Domain #1
Region A:
Residues: [1-474]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTILTYPFKN LPTASKWALR FSIRPLSCSS QLRAAPAVQT KTKKTLAKPN IRNVVVVDGV  60
   61 RTPFLLSGTS YKDLMPHDLA RAALTGLLHR TSVPKEVVDY IIFGTVIQEV KTSNVAREAA 120
  121 LGAGFSDKTP AHTVTMACIS ANQAMTTGVG LIASGQCDVI VAGGVELMSD VPIRHSRKMR 180
  181 KLMLDLNKAK SMGQRLSLIS KFRFNFLAPE LPAVSEFSTS ETMGHSADRL AAAFAVSRLE 240
  241 QDEYALRSHS LAKKAQDEGL LSDVVPFKVP GKDTVTKDNG IRPSSLEQMA KLKPAFIKPY 300
  301 GTVTAANSSF LTDGASAMLI MAEEKALAMG YKPKAYLRDF MYVSQDPKDQ LLLGPTYATP 360
  361 KVLEKAGLTM NDIDAFEFHE AFSGQILANF KAMDSDWFAE NYMGRKTKVG LPPLEKFNNW 420
  421 GGSLSLGHPF GATGCRLVMA AANRLRKEGG QYGLVAACAA GGQGHAMIVE AYPK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 74.221849
Match: 1ulqA
Description: Crystal structure of tt0182 from Thermus thermophilus HB8
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
acetyl-CoA C-acyltransferase activity 8.08119341370748 bayes_pls_golite062009
long-chain-3-hydroxyacyl-CoA dehydrogenase activity 7.45371477074071 bayes_pls_golite062009
long-chain-enoyl-CoA hydratase activity 5.63866392580915 bayes_pls_golite062009
transferase activity, transferring acyl groups 4.96408928512745 bayes_pls_golite062009
fatty acid synthase activity 3.79121338118181 bayes_pls_golite062009
3-oxoacyl-[acyl-carrier-protein] synthase activity 3.71249191203055 bayes_pls_golite062009
C-acyltransferase activity 3.27532895419051 bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups 3.14957464437124 bayes_pls_golite062009
acyltransferase activity 3.06879684191353 bayes_pls_golite062009
transferase activity 2.15834234036431 bayes_pls_golite062009
catalytic activity 2.14505178497871 bayes_pls_golite062009
3-hydroxyacyl-CoA dehydrogenase activity 1.87304265492939 bayes_pls_golite062009
transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer 1.77798276950874 bayes_pls_golite062009
acetyl-CoA C-acetyltransferase activity 1.50839304016514 bayes_pls_golite062009
C-acetyltransferase activity 1.19264084089277 bayes_pls_golite062009
hydroxymethylglutaryl-CoA synthase activity 1.16785899347652 bayes_pls_golite062009
acetyltransferase activity 0.6519546920419 bayes_pls_golite062009
binding 0.415385255550741 bayes_pls_golite062009
enoyl-CoA hydratase activity 0.21899828831708 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle