| Protein: | PZF1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 429 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PZF1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [4..384] | [202..576] |
|
Region A: Residues: [1-188] |
1 11 21 31 41 51
| | | | | |
1 MGGEVLNNEG MPLAELKQET IPISRSESSE SLNSLTSTRS SSSNRPKTYF CDYDGCDKAF 60
61 TRPSILTEHQ LSVHQGLRAF QCDKCAKSFV KKSHLERHLY THSDTKPFQC SYCGKGVTTR 120
121 QQLKRHEVTH TKSFICPEEG CNLRFYKHPQ LRAHILSVHL HKLTCPHCNK SFQRPYRLRN 180
181 HISKHHDP
|
| Detection Method: |  |
| Confidence: | 156.68867 |
| Match: | 1ubdC_ |
| Description: | Ying-yang 1 (yy1, zinc finger domain) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [189-350] |
1 11 21 31 41 51
| | | | | |
1 EVENPYQCTF AGCCKEFRIW SQLQSHIKND HPKLKCPICS KPCVGENGLQ MHMIIHDDSL 60
61 VTKNWKCHIC PDMSFSRKHD LLTHYGSIHT EEDIPLELKY KISDIQQLVQ DHGVQLGNSK 120
121 HSNEQDEEKI SNRLRKRRKL TENNNVEFLQ NEVDLEKRLE SG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [351-429] |
1 11 21 31 41 51
| | | | | |
1 ENGLNLLLNT VGRKYRCFYN NCSRTFKTKE KYEKHIDKHK VHELKLKILQ EKEENKTLVD 60
61 QNHKEPFIIQ KETQSAGDK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| transcription regulator activity | 4.47951889934838 | bayes_pls_golite062009 |
| nucleic acid binding | 4.35187767955595 | bayes_pls_golite062009 |
| DNA binding | 4.31051339571017 | bayes_pls_golite062009 |
| transcription factor activity | 3.28758716579796 | bayes_pls_golite062009 |
| transcription repressor activity | 3.07956158665183 | bayes_pls_golite062009 |
| binding | 2.99742524370422 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.96255357208943 | bayes_pls_golite062009 |
| transcription activator activity | 1.97757778483124 | bayes_pls_golite062009 |
| chromatin binding | 1.91511881662436 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 1.35857850481346 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.26862497534835 | bayes_pls_golite062009 |
| transcription factor binding | 1.23738346570539 | bayes_pls_golite062009 |
| transcription corepressor activity | 1.16887811832337 | bayes_pls_golite062009 |
| protein binding | 0.952480850696098 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.781519259241993 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.627794176881836 | bayes_pls_golite062009 |
| catalytic activity | 0.263007611601737 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.0855506955761403 | bayes_pls_golite062009 |
