| Protein: | SGT2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 346 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SGT2.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-61 | [2..328] | [137..495] |
|
|
5.0E-61 | [2..328] | [108..466] |
|
|
1.0E-60 | [2..328] | [98..456] |
|
|
1.0E-60 | [2..328] | [98..456] |
|
|
2.0E-57 | [2..328] | [212..570] |
|
|
2.0E-55 | [2..340] | [348..707] |
|
|
7.0E-55 | [2..325] | [140..495] |
|
|
2.0E-50 | [2..294] | [69..353] |
|
Region A: Residues: [1-61] |
1 11 21 31 41 51
| | | | | |
1 MSASKEEIAA LIVNYFSSIV EKKEISEDGA DSLNVAMDCI SEAFGFEREA VSGILGKSEF 60
61 K
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [62-291] |
1 11 21 31 41 51
| | | | | |
1 GQHLADILNS ASRVPESNKK DDAENVEINI PEDDAETKAK AEDLKMQGNK AMANKDYELA 60
61 INKYTEAIKV LPTNAIYYAN RAAAHSSLKE YDQAVKDAES AISIDPSYFR GYSRLGFAKY 120
121 AQGKPEEALE AYKKVLDIEG DNATEAMKRD YESAKKKVEQ SLNLEKTVPE QSRDADVDAS 180
181 QGASAGGLPD LGSLLGGGLG GLMNNPQLMQ AAQKMMSNPG AMQNIQKMMQ
|
| Detection Method: | |
| Confidence: | 173.9691 |
| Match: | 1a17__ |
| Description: | Protein phosphatase 5 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.12690485191789 | bayes_pls_golite062009 |
| protein binding | 1.65083457326273 | bayes_pls_golite062009 |
| heat shock protein binding | 1.35268080101836 | bayes_pls_golite062009 |
| unfolded protein binding | 1.03065657981002 | bayes_pls_golite062009 |
| nucleic acid binding | 0.41706917101675 | bayes_pls_golite062009 |
| hydrolase activity | 0.252678932946087 | bayes_pls_golite062009 |
| transcription regulator activity | 0.194719472400022 | bayes_pls_golite062009 |
| DNA binding | 0.17736976899009 | bayes_pls_golite062009 |
|
Region A: Residues: [292-346] |
1 11 21 31 41 51
| | | | | |
1 DPSIRQMAEG FASGGGTPNL SDLMNNPALR NMAGNLFGGA GAQSTDETPD NENKQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
