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Protein Overview: SEC_ARATH

General Information:
Name(s) found: SEC_ARATH [Swiss-Prot]
Description(s) found:
Found 18 descriptions.
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  • Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC OS=Arabidopsis thaliana GN=SEC PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 977 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: protein amino acid O-linked glycosylation [IDA][ISS]
    Molecular Function: transferase activity, transferring glycosyl groups [IDA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISSKNGAAM ISRPVFLSDR VDEVFSRKLD LSVSSSSSSS LLQQFNKTHE GDDDARLALA  60
   61 HQLYKGGDFK QALEHSNMVY QRNPLRTDNL LLIGAIYYQL QEYDMCIARN EEALRIQPQF 120
  121 AECYGNMANA WKEKGDTDRA IRYYLIAIEL RPNFADAWSN LASAYMRKGR LSEATQCCQQ 180
  181 ALSLNPLLVD AHSNLGNLMK AQGLIHEAYS CYLEAVRIQP TFAIAWSNLA GLFMESGDLN 240
  241 RALQYYKEAV KLKPAFPDAY LNLGNVYKAL GRPTEAIMCY QHALQMRPNS AMAFGNIASI 300
  301 YYEQGQLDLA IRHYKQALSR DPRFLEAYNN LGNALKDIGR VDEAVRCYNQ CLALQPNHPQ 360
  361 AMANLGNIYM EWNMMGPASS LFKATLAVTT GLSAPFNNLA IIYKQQGNYS DAISCYNEVL 420
  421 RIDPLAADAL VNRGNTYKEI GRVTEAIQDY MHAINFRPTM AEAHANLASA YKDSGHVEAA 480
  481 ITSYKQALLL RPDFPEATCN LLHTLQCVCC WEDRSKMFAE VESIIRRQIN MSVLPSVQPF 540
  541 HAIAYPIDPI LALEISRKYA AHCSIIASRF GLPPFTHPAG LPVKREGGFK RLRIGYVSSD 600
  601 FGNHPLSHLM GSVFGMHNRE NVEVFCYALS ANDNTEWRQR IQSEAEHFLD VSAMSSDAIA 660
  661 KIINQDKIQI LINLNGYTKG ARNEIFAMQP APIQVSYMGF PGTTGATYID YLVTDEFVSP 720
  721 LQYAHIYSEK LVHLPHCYFV NDYKQKNQDV LDPNSKPKRS DYGLPEDKFI FACFNQLYKM 780
  781 DPEIVNTWCN ILKRVPNSAL WLLRFPAAGE MRFRTYAAAQ GVQPDQIIFT DVAMKSEHIR 840
  841 RSVLADVILD TPLCNGHTTG TDVLWAGVPM ITLPLEKMAT RVAGSLCLAT GLGHGMIVNS 900
  901 LEEYEEKAVS LALNKPKLQA LTKELRASRL TCPLFDTMRW VKNLERSYFK MWNLHCSGQQ 960
  961 PQHFKVLEND LEFPHDR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..390] PSI-BLAST 91.09691 The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.
    2 View Details [391..591] PSI-BLAST 12.30103 No description for 2if4A was found.
    3 View Details [592..977] PSI-BLAST 111.0 No description for 2vsnA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle