| Protein: | SEC_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 977 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
No multiple sequence alignment data found for SEC_ARATH.
|
Region A: Residues: [1-390] |
1 11 21 31 41 51
| | | | | |
1 MISSKNGAAM ISRPVFLSDR VDEVFSRKLD LSVSSSSSSS LLQQFNKTHE GDDDARLALA 60
61 HQLYKGGDFK QALEHSNMVY QRNPLRTDNL LLIGAIYYQL QEYDMCIARN EEALRIQPQF 120
121 AECYGNMANA WKEKGDTDRA IRYYLIAIEL RPNFADAWSN LASAYMRKGR LSEATQCCQQ 180
181 ALSLNPLLVD AHSNLGNLMK AQGLIHEAYS CYLEAVRIQP TFAIAWSNLA GLFMESGDLN 240
241 RALQYYKEAV KLKPAFPDAY LNLGNVYKAL GRPTEAIMCY QHALQMRPNS AMAFGNIASI 300
301 YYEQGQLDLA IRHYKQALSR DPRFLEAYNN LGNALKDIGR VDEAVRCYNQ CLALQPNHPQ 360
361 AMANLGNIYM EWNMMGPASS LFKATLAVTT
|
| Detection Method: |  |
| Confidence: | 91.09691 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [391-591] |
1 11 21 31 41 51
| | | | | |
1 GLSAPFNNLA IIYKQQGNYS DAISCYNEVL RIDPLAADAL VNRGNTYKEI GRVTEAIQDY 60
61 MHAINFRPTM AEAHANLASA YKDSGHVEAA ITSYKQALLL RPDFPEATCN LLHTLQCVCC 120
121 WEDRSKMFAE VESIIRRQIN MSVLPSVQPF HAIAYPIDPI LALEISRKYA AHCSIIASRF 180
181 GLPPFTHPAG LPVKREGGFK R
|
| Detection Method: | |
| Confidence: | 12.30103 |
| Match: | 2if4A |
| Description: | No description for 2if4A was found. |
|
Region A: Residues: [592-977] |
1 11 21 31 41 51
| | | | | |
1 LRIGYVSSDF GNHPLSHLMG SVFGMHNREN VEVFCYALSA NDNTEWRQRI QSEAEHFLDV 60
61 SAMSSDAIAK IINQDKIQIL INLNGYTKGA RNEIFAMQPA PIQVSYMGFP GTTGATYIDY 120
121 LVTDEFVSPL QYAHIYSEKL VHLPHCYFVN DYKQKNQDVL DPNSKPKRSD YGLPEDKFIF 180
181 ACFNQLYKMD PEIVNTWCNI LKRVPNSALW LLRFPAAGEM RFRTYAAAQG VQPDQIIFTD 240
241 VAMKSEHIRR SVLADVILDT PLCNGHTTGT DVLWAGVPMI TLPLEKMATR VAGSLCLATG 300
301 LGHGMIVNSL EEYEEKAVSL ALNKPKLQAL TKELRASRLT CPLFDTMRWV KNLERSYFKM 360
361 WNLHCSGQQP QHFKVLENDL EFPHDR
|
| Detection Method: | |
| Confidence: | 111.0 |
| Match: | 2vsnA |
| Description: | No description for 2vsnA was found. |
