| Protein: | SGT2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 346 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SGT2.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-61 | [2..328] | [137..495] |
|
|
5.0E-61 | [2..328] | [108..466] |
|
|
1.0E-60 | [2..328] | [98..456] |
|
|
1.0E-60 | [2..328] | [98..456] |
|
|
2.0E-57 | [2..328] | [212..570] |
|
|
2.0E-55 | [2..340] | [348..707] |
|
|
7.0E-55 | [2..325] | [140..495] |
|
|
2.0E-50 | [2..294] | [69..353] |
|
Region A: Residues: [1-61] |
1 11 21 31 41 51
| | | | | |
1 MSASKEEIAA LIVNYFSSIV EKKEISEDGA DSLNVAMDCI SEAFGFEREA VSGILGKSEF 60
61 K
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.672 | a.4.1 | Homeodomain-like |
| View | Download | 0.646 | a.4.1 | Homeodomain-like |
| View | Download | 0.645 | a.4.1 | Homeodomain-like |
| View | Download | 0.626 | a.159.2 | FF domain |
| View | Download | 0.615 | a.4.1 | Homeodomain-like |
| View | Download | 0.603 | a.4.1 | Homeodomain-like |
| View | Download | 0.583 | a.159.2 | FF domain |
| View | Download | 0.556 | a.4.1 | Homeodomain-like |
| View | Download | 0.556 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.554 | a.4.1 | Homeodomain-like |
| View | Download | 0.539 | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| View | Download | 0.528 | a.112.1 | Description not found. |
| View | Download | 0.522 | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| View | Download | 0.511 | a.112.1 | Description not found. |
| View | Download | 0.500 | d.102.1 | Regulatory factor Nef |
| View | Download | 0.499 | d.96.1 | Tetrahydrobiopterin biosynthesis enzymes-like |
| View | Download | 0.497 | a.4.1 | Homeodomain-like |
| View | Download | 0.491 | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| View | Download | 0.491 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.490 | a.2.7 | tRNA-binding arm |
| View | Download | 0.488 | a.112.1 | Description not found. |
| View | Download | 0.488 | a.4.1 | Homeodomain-like |
| View | Download | 0.480 | a.4.1 | Homeodomain-like |
| View | Download | 0.476 | a.4.1 | Homeodomain-like |
| View | Download | 0.476 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.475 | a.4.1 | Homeodomain-like |
| View | Download | 0.446 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.445 | a.112.1 | Description not found. |
| View | Download | 0.440 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.436 | a.51.1 | Cytochrome c oxidase subunit h |
| View | Download | 0.432 | a.4.1 | Homeodomain-like |
| View | Download | 0.431 | a.4.1 | Homeodomain-like |
| View | Download | 0.431 | a.23.4 | Mitochondrial import receptor subunit Tom20 |
| View | Download | 0.425 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.422 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.422 | a.3.1 | Cytochrome c |
| View | Download | 0.418 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.418 | a.2.7 | tRNA-binding arm |
| View | Download | 0.413 | a.39.1 | EF-hand |
| View | Download | 0.406 | a.112.1 | Description not found. |
| View | Download | 0.398 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.390 | a.159.2 | FF domain |
| View | Download | 0.387 | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| View | Download | 0.381 | a.4.1 | Homeodomain-like |
| View | Download | 0.378 | a.60.2 | RuvA domain 2-like |
| View | Download | 0.372 | a.4.1 | Homeodomain-like |
| View | Download | 0.370 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.369 | a.159.2 | FF domain |
| View | Download | 0.369 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.368 | a.112.1 | Description not found. |
| View | Download | 0.365 | a.159.2 | FF domain |
| View | Download | 0.364 | a.23.4 | Mitochondrial import receptor subunit Tom20 |
| View | Download | 0.359 | a.4.1 | Homeodomain-like |
| View | Download | 0.359 | a.2.7 | tRNA-binding arm |
| View | Download | 0.353 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.350 | a.112.1 | Description not found. |
| View | Download | 0.341 | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| View | Download | 0.338 | a.4.1 | Homeodomain-like |
| View | Download | 0.338 | a.159.2 | FF domain |
| View | Download | 0.335 | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| View | Download | 0.333 | d.58.49 | YajQ-like |
| View | Download | 0.332 | a.4.1 | Homeodomain-like |
| View | Download | 0.331 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.329 | a.159.2 | FF domain |
| View | Download | 0.323 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.317 | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| View | Download | 0.316 | a.2.7 | tRNA-binding arm |
| View | Download | 0.316 | a.2.7 | tRNA-binding arm |
| View | Download | 0.316 | a.112.1 | Description not found. |
| View | Download | 0.312 | a.112.1 | Description not found. |
| View | Download | 0.306 | a.23.4 | Mitochondrial import receptor subunit Tom20 |
| View | Download | 0.306 | a.4.1 | Homeodomain-like |
| View | Download | 0.304 | a.159.2 | FF domain |
| View | Download | 0.303 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.303 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.301 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.300 | d.39.1 | Dynein light chain 8 (DLC8) |
| View | Download | 0.300 | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| View | Download | 0.298 | d.58.49 | YajQ-like |
| View | Download | 0.295 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.292 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.290 | g.63.1 | Mollusk pheromone |
| View | Download | 0.290 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.287 | a.4.1 | Homeodomain-like |
| View | Download | 0.281 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.281 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.280 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.278 | a.17.1 | p8-MTCP1 |
| View | Download | 0.277 | a.23.4 | Mitochondrial import receptor subunit Tom20 |
| View | Download | 0.276 | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.274 | a.4.1 | Homeodomain-like |
| View | Download | 0.272 | a.112.1 | Description not found. |
| View | Download | 0.272 | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| View | Download | 0.272 | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.270 | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.268 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.266 | a.159.2 | FF domain |
| View | Download | 0.266 | d.58.49 | YajQ-like |
| View | Download | 0.264 | a.4.1 | Homeodomain-like |
| View | Download | 0.263 | a.65.1 | Annexin |
| View | Download | 0.261 | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.260 | d.52.5 | Probable GTPase Der, C-terminal domain |
| View | Download | 0.260 | a.4.1 | Homeodomain-like |
| View | Download | 0.260 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.259 | a.60.11 | Hypothetical protein YjbJ |
| View | Download | 0.257 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.255 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.254 | d.52.1 | Alpha-lytic protease prodomain |
| View | Download | 0.251 | g.63.1 | Mollusk pheromone |
| View | Download | 0.246 | a.32.1 | Transcription factor IIA (TFIIA), alpha-helical domain |
| View | Download | 0.244 | a.65.1 | Annexin |
| View | Download | 0.244 | a.2.3 | Chaperone J-domain |
| View | Download | 0.241 | d.58.49 | YajQ-like |
| View | Download | 0.239 | d.52.1 | Alpha-lytic protease prodomain |
| View | Download | 0.238 | a.28.1 | ACP-like |
| View | Download | 0.237 | d.58.38 | Urease metallochaperone UreE, C-terminal domain |
| View | Download | 0.236 | a.4.1 | Homeodomain-like |
| View | Download | 0.235 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.235 | d.58.25 | Killer toxin KP6 alpha-subunit |
| View | Download | 0.234 | a.4.1 | Homeodomain-like |
| View | Download | 0.233 | a.112.1 | Description not found. |
| View | Download | 0.233 | d.58.17 | Metal-binding domain |
| View | Download | 0.229 | d.58.49 | YajQ-like |
| View | Download | 0.229 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.229 | a.161.1 | beta-catenin-interacting protein ICAT |
| View | Download | 0.227 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.226 | a.159.2 | FF domain |
| View | Download | 0.226 | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.225 | a.60.11 | Hypothetical protein YjbJ |
| View | Download | 0.225 | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.223 | a.112.1 | Description not found. |
| View | Download | 0.222 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.221 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.216 | a.3.1 | Cytochrome c |
| View | Download | 0.216 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.216 | a.2.2 | Ribosomal protein L29 (L29p) |
| View | Download | 0.215 | a.26.1 | 4-helical cytokines |
| View | Download | 0.215 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.214 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.214 | a.51.1 | Cytochrome c oxidase subunit h |
| View | Download | 0.214 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.214 | a.2.2 | Ribosomal protein L29 (L29p) |
| View | Download | 0.212 | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| View | Download | 0.212 | d.58.38 | Urease metallochaperone UreE, C-terminal domain |
| View | Download | 0.210 | a.112.1 | Description not found. |
| View | Download | 0.209 | a.3.1 | Cytochrome c |
| View | Download | 0.207 | d.58.49 | YajQ-like |
| View | Download | 0.206 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.206 | a.39.1 | EF-hand |
| View | Download | 0.206 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.205 | a.23.4 | Mitochondrial import receptor subunit Tom20 |
| View | Download | 0.205 | a.23.4 | Mitochondrial import receptor subunit Tom20 |
| View | Download | 0.205 | d.58.11 | EF-G/eEF-2 domains III and V |
| View | Download | 0.204 | a.112.1 | Description not found. |
| View | Download | 0.204 | a.23.4 | Mitochondrial import receptor subunit Tom20 |
| View | Download | 0.202 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.202 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.201 | d.58.49 | YajQ-like |
|
Region A: Residues: [62-291] |
1 11 21 31 41 51
| | | | | |
1 GQHLADILNS ASRVPESNKK DDAENVEINI PEDDAETKAK AEDLKMQGNK AMANKDYELA 60
61 INKYTEAIKV LPTNAIYYAN RAAAHSSLKE YDQAVKDAES AISIDPSYFR GYSRLGFAKY 120
121 AQGKPEEALE AYKKVLDIEG DNATEAMKRD YESAKKKVEQ SLNLEKTVPE QSRDADVDAS 180
181 QGASAGGLPD LGSLLGGGLG GLMNNPQLMQ AAQKMMSNPG AMQNIQKMMQ
|
| Detection Method: | |
| Confidence: | 173.9691 |
| Match: | 1a17__ |
| Description: | Protein phosphatase 5 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.12690485191789 | bayes_pls_golite062009 |
| protein binding | 1.65083457326273 | bayes_pls_golite062009 |
| heat shock protein binding | 1.35268080101836 | bayes_pls_golite062009 |
| unfolded protein binding | 1.03065657981002 | bayes_pls_golite062009 |
| nucleic acid binding | 0.41706917101675 | bayes_pls_golite062009 |
| hydrolase activity | 0.252678932946087 | bayes_pls_golite062009 |
| transcription regulator activity | 0.194719472400022 | bayes_pls_golite062009 |
| DNA binding | 0.17736976899009 | bayes_pls_golite062009 |
|
Region A: Residues: [292-346] |
1 11 21 31 41 51
| | | | | |
1 DPSIRQMAEG FASGGGTPNL SDLMNNPALR NMAGNLFGGA GAQSTDETPD NENKQ
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.440 | d.68.7 | R3H domain |
| View | Download | 0.537 | d.58.38 | Urease metallochaperone UreE, C-terminal domain |
| View | Download | 0.352 | g.63.1 | Mollusk pheromone |
| View | Download | 0.343 | d.68.7 | R3H domain |
| View | Download | 0.312 | d.68.7 | R3H domain |
| View | Download | 0.309 | d.68.7 | R3H domain |
| View | Download | 0.303 | d.58.17 | Metal-binding domain |
| View | Download | 0.282 | d.68.7 | R3H domain |
| View | Download | 0.259 | d.68.3 | SirA-like |
| View | Download | 0.254 | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.238 | d.68.7 | R3H domain |
| View | Download | 0.230 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.227 | a.4.1 | Homeodomain-like |
| View | Download | 0.225 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.223 | d.68.7 | R3H domain |
| View | Download | 0.223 | d.68.7 | R3H domain |
| View | Download | 0.223 | d.68.7 | R3H domain |
| View | Download | 0.216 | d.68.3 | SirA-like |
| View | Download | 0.216 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.213 | a.180.1 | N-terminal, cytoplasmic domain of anti-sigmaE factor RseA |
| View | Download | 0.212 | d.68.7 | R3H domain |
| View | Download | 0.207 | d.68.5 | C-terminal domain of ProRS |
| View | Download | 0.204 | d.68.5 | C-terminal domain of ProRS |
