| Protein: | YSP3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 478 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YSP3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..478] | [1..478] |
|
|
0.0 | [37..471] | [5..444] |
|
|
0.0 | [34..471] | [1..444] |
|
|
0.0 | [38..471] | [5..452] |
|
|
0.0 | [32..471] | [3..458] |
|
|
0.0 | [35..471] | [3..447] |
|
Region A: Residues: [1-68] |
1 11 21 31 41 51
| | | | | |
1 MKFSTILPIL WANCCLCMII PDFDGIVRFI ENIDGTRSVR AGEGLGQHDP GNFHTEHQHV 60
61 AHKTEFLP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [69-172] |
1 11 21 31 41 51
| | | | | |
1 YRYVIVFNED ISLQQIQSHM QVVQKDHSTS VGKLTENDAF WRVISSSVSS KSQFGGIDNF 60
61 FDINGLFRGY TGYFTDEIIK IISQDPIIKF VEQETTVKIS NSSL
|
| Detection Method: | |
| Confidence: | 8.0 |
| Match: | 1kn6A_ |
| Description: | Prohormone convertase 1 pro-domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 4.68838733699853 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 4.20928698248021 | bayes_pls_golite062009 |
| endopeptidase activity | 3.45296270246929 | bayes_pls_golite062009 |
| hydrolase activity | 3.36483239319728 | bayes_pls_golite062009 |
| serine hydrolase activity | 1.90036575189745 | bayes_pls_golite062009 |
| serine-type peptidase activity | 1.89198766955068 | bayes_pls_golite062009 |
| binding | 1.85875472341221 | bayes_pls_golite062009 |
| serine-type endopeptidase activity | 1.23150012549143 | bayes_pls_golite062009 |
| catalytic activity | 0.597535457699629 | bayes_pls_golite062009 |
| protein binding | 0.380935140681308 | bayes_pls_golite062009 |
|
Region A: Residues: [173-478] |
1 11 21 31 41 51
| | | | | |
1 QEEAPWGLHR VSHREKPKYG QDLEYLYEDA AGKGVTSYVL DTGIDTEHED FEGRAEWGAV 60
61 IPANDEASDL NGHGTHCAGI IGSKHFGVAK NTKIVAVKVL RSNGEGTVSD VIKGIEYVTK 120
121 EHIESSKKKN KEFKGSTANL SLGSSKSLAM EMAVNAAVDS GVHFAIAAGN EDEDACLSSP 180
181 AGAEKSITVG ASTFSDDRAF FSNWGTCVDV FAPGINIMST YIGSRNATLS LSGTSMASPH 240
241 VAGILSYFLS LQPAPDSEFF NDAPSPQELK EKVLKFSTQG VLGDIGDDTP NKLIYNGGGK 300
301 KLDGFW
|
| Detection Method: | |
| Confidence: | 565.67837 |
| Match: | 1ic6A_ |
| Description: | Proteinase K |
Matching Structure (courtesy of the PDB): |
|
