| Protein: | ACC1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 2233 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACC1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [738..1808] | [1..1071] |
|
|
0.0 | [926..2198] | [867..2080] |
|
|
0.0 | [738..1808] | [1..1078] |
|
|
0.0 | [39..2232] | [98..2315] |
|
|
0.0 | [36..2232] | [94..2337] |
|
|
0.0 | [19..1478] | [301..1712] |
|
|
0.0 | [1..2233] | [1..2237] |
|
Region A: Residues: [1-174] |
1 11 21 31 41 51
| | | | | |
1 MSEESLFESS PQKMEYEITN YSERHTELPG HFIGLNTVDK LEESPLRDFV KSHGGHTVIS 60
61 KILIANNGIA AVKEIRSVRK WAYETFGDDR TVQFVAMATP EDLEANAEYI RMADQYIEVP 120
121 GGTNNNNYAN VDLIVDIAER ADVDAVWAGW GHASENPLLP EKLSQSKRKV IFIG
|
| Detection Method: |  |
| Confidence: | 700.228787 |
| Match: | 1bncA_ |
| Description: | Biotin carboxylase subunit of acetyl-CoA carboxylase (BC), C-domain; Biotin carboxylase subunit of acetyl-CoA carboxylase, (BC), N-domain; Biotin carboxylase subunit of acetyl-CoA carboxylase (BC), domain 2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| acetyl-CoA carboxylase activity | 7.97944928068929 | bayes_pls_golite062009 |
| CoA carboxylase activity | 7.26031530137805 | bayes_pls_golite062009 |
| ligase activity, forming carbon-carbon bonds | 7.11064677387039 | bayes_pls_golite062009 |
| biotin carboxylase activity | 6.9547407447638 | bayes_pls_golite062009 |
| ligase activity | 6.37416374794432 | bayes_pls_golite062009 |
| carbamoyl-phosphate synthase activity | 4.25267317906061 | bayes_pls_golite062009 |
| carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity | 4.17451795830682 | bayes_pls_golite062009 |
| succinate-CoA ligase activity | 3.60521632399322 | bayes_pls_golite062009 |
| CoA-ligase activity | 3.23896308753196 | bayes_pls_golite062009 |
| acid-thiol ligase activity | 3.04454283840859 | bayes_pls_golite062009 |
| methylcrotonoyl-CoA carboxylase activity | 2.98357921316004 | bayes_pls_golite062009 |
| glutathione synthase activity | 2.75320638765219 | bayes_pls_golite062009 |
| ligase activity, forming carbon-sulfur bonds | 2.73831154716701 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 1.74185999556024 | bayes_pls_golite062009 |
| glutathione binding | 1.60917807172757 | bayes_pls_golite062009 |
| phosphoribosylaminoimidazole carboxylase activity | 1.57708889650281 | bayes_pls_golite062009 |
| succinate-CoA ligase (ADP-forming) activity | 1.55053478055591 | bayes_pls_golite062009 |
| binding | 1.51238789441513 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 1.40905042897991 | bayes_pls_golite062009 |
| transporter activity | 1.29381792295125 | bayes_pls_golite062009 |
| carbon-nitrogen ligase activity, with glutamine as amido-N-donor | 1.11645327303429 | bayes_pls_golite062009 |
| catalytic activity | 1.08688404807699 | bayes_pls_golite062009 |
| phosphoribosylamine-glycine ligase activity | 1.04915286326924 | bayes_pls_golite062009 |
| propionyl-CoA carboxylase activity | 0.643677287269589 | bayes_pls_golite062009 |
| hydrolase activity | 0.543813086594651 | bayes_pls_golite062009 |
| protein binding | 0.455938814211606 | bayes_pls_golite062009 |
| succinate-CoA ligase (GDP-forming) activity | 0.34559667514727 | bayes_pls_golite062009 |
|
Region A: Residues: [175-201] |
1 11 21 31 41 51
| | | | | |
1 PPGNAMRSLG DKISSTIVAQ SAKVPCI
|
|
Region B: Residues: [293-318] |
1 11 21 31 41 51
| | | | | |
1 AGRARHLEVQ LLADQYGTNI SLFGRD
|
|
Region C: Residues: [332-452] |
1 11 21 31 41 51
| | | | | |
1 APVTIAKAET FHEMEKAAVR LGKLVGYVSA GTVEYLYSHD DGKFYFLELN PRLQVEHPTT 60
61 EMVSGVNLPA AQLQIAMGIP MHRISDIRTL YGMNPHSASE IDFEFKTQDA TKKQRRPIPK 120
121 G
|
| Detection Method: | |
| Confidence: | 700.228787 |
| Match: | 1bncA_ |
| Description: | Biotin carboxylase subunit of acetyl-CoA carboxylase (BC), C-domain; Biotin carboxylase subunit of acetyl-CoA carboxylase, (BC), N-domain; Biotin carboxylase subunit of acetyl-CoA carboxylase (BC), domain 2 |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [202-292] |
1 11 21 31 41 51
| | | | | |
1 PWSGTGVDTV HVDEKTGLVS VDDDIYQKGC CTSPEDGLQK AKRIGFPVMI KASEGGGGKG 60
61 IRQVEREEDF IALYHQAANE IPGSPIFIMK L
|
|
Region B: Residues: [319-331] |
1 11 21 31 41 51
| | | | | |
1 CSVQRRHQKI IEE
|
|
Region C: Residues: [453-603] |
1 11 21 31 41 51
| | | | | |
1 HCTACRITSE DPNDGFKPSG GTLHELNFRS SSNVWGYFSV GNNGNIHSFS DSQFGHIFAF 60
61 GENRQASRKH MVVALKELSI RGDFRTTVEY LIKLLETEDF EDNTITTGWL DDLITHKMTA 120
121 EKPDPTLAVI CGAATKAFLA SEEARHKYIE S
|
| Detection Method: | |
| Confidence: | 700.228787 |
| Match: | 1bncA_ |
| Description: | Biotin carboxylase subunit of acetyl-CoA carboxylase (BC), C-domain; Biotin carboxylase subunit of acetyl-CoA carboxylase, (BC), N-domain; Biotin carboxylase subunit of acetyl-CoA carboxylase (BC), domain 2 |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [604-695] |
1 11 21 31 41 51
| | | | | |
1 LQKGQVLSKD LLQTMFPVDF IHEGKRYKFT VAKSGNDRYT LFINGSKCDI ILRQLSDGGL 60
61 LIAIGGKSHT IYWKEEVAAT RLSVDSMTTL LE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.930 | b.60.1 | Lipocalins |
| View | Download | 0.898 | d.15.5 | Staphylokinase/streptokinase |
| View | Download | 0.931 | b.101.1 | Ribonuclease domain of colicin E3 |
| View | Download | 0.959 | b.61.2 | Metalloprotease inhibitor |
| View | Download | 0.909 | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
| View | Download | 0.884 | b.61.2 | Metalloprotease inhibitor |
| View | Download | 0.869 | b.55.1 | PH domain-like |
| View | Download | 0.865 | b.60.1 | Lipocalins |
| View | Download | 0.859 | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.845 | d.15.1 | Ubiquitin-like |
| View | Download | 0.835 | b.1.1 | Immunoglobulin |
| View | Download | 0.823 | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
| View | Download | 0.794 | b.55.1 | PH domain-like |
| View | Download | 0.770 | b.55.1 | PH domain-like |
| View | Download | 0.766 | d.233.1 | Inhibitor of vertebrate lysozyme, Ivy |
| View | Download | 0.754 | b.63.1 | Oncogene products |
| View | Download | 0.749 | d.93.1 | SH2 domain |
| View | Download | 0.742 | b.1.1 | Immunoglobulin |
| View | Download | 0.739 | b.60.1 | Lipocalins |
| View | Download | 0.718 | d.15.2 | CAD & PB1 domains |
| View | Download | 0.717 | d.82.2 | Frataxin-like |
| View | Download | 0.702 | d.82.2 | Frataxin-like |
| View | Download | 0.699 | d.93.1 | SH2 domain |
| View | Download | 0.692 | b.55.1 | PH domain-like |
| View | Download | 0.687 | b.55.1 | PH domain-like |
| View | Download | 0.687 | b.63.1 | Oncogene products |
| View | Download | 0.685 | d.93.1 | SH2 domain |
| View | Download | 0.672 | d.93.1 | SH2 domain |
| View | Download | 0.664 | b.1.1 | Immunoglobulin |
| View | Download | 0.654 | d.150.1 | 4'-phosphopantetheinyl transferase |
| View | Download | 0.639 | b.60.1 | Lipocalins |
| View | Download | 0.634 | b.49.1 | N-terminal domain of alpha and beta subunits of F1 ATP synthase |
| View | Download | 0.617 | d.93.1 | SH2 domain |
| View | Download | 0.614 | b.1.1 | Immunoglobulin |
| View | Download | 0.613 | g.41.3 | Zinc beta-ribbon |
| View | Download | 0.607 | b.61.1 | Avidin/streptavidin |
| View | Download | 0.590 | b.1.1 | Immunoglobulin |
| View | Download | 0.555 | b.1.1 | Immunoglobulin |
| View | Download | 0.554 | d.110.1 | Profilin (actin-binding protein) |
| View | Download | 0.551 | c.55.5 | MTH1175-like |
| View | Download | 0.545 | b.114.1 | N-utilization substance G protein NusG, insert domain |
| View | Download | 0.543 | g.41.3 | Zinc beta-ribbon |
| View | Download | 0.538 | b.1.1 | Immunoglobulin |
| View | Download | 0.531 | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.530 | b.118.1 | FAS1 domain |
| View | Download | 0.526 | b.1.1 | Immunoglobulin |
| View | Download | 0.517 | d.150.1 | 4'-phosphopantetheinyl transferase |
| View | Download | 0.514 | b.61.5 | Dipeptidyl peptidase I (cathepsin C), exclusion domain |
| View | Download | 0.511 | b.92.1 | Composite domain of metallo-dependent hydrolases |
| View | Download | 0.499 | d.50.3 | PI-Pfui intein middle domain |
| View | Download | 0.498 | b.60.1 | Lipocalins |
| View | Download | 0.483 | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.474 | b.1.18 | E set domains |
| View | Download | 0.464 | b.7.2 | Periplasmic chaperone C-domain |
| View | Download | 0.462 | b.1.1 | Immunoglobulin |
| View | Download | 0.458 | b.118.1 | FAS1 domain |
| View | Download | 0.454 | b.1.1 | Immunoglobulin |
| View | Download | 0.447 | b.1.1 | Immunoglobulin |
| View | Download | 0.439 | d.105.1 | Clathrin adaptor appendage, alpha and beta chain-specific domain |
| View | Download | 0.433 | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.427 | b.115.1 | Fucose-binding lectin II (PA-IIL) |
| View | Download | 0.423 | d.204.1 | Ribosome binding protein Y (YfiA homologue) |
| View | Download | 0.408 | d.58.20 | NAD-binding domain of HMG-CoA reductase |
| View | Download | 0.406 | c.51.3 | B12-dependend dehydatases associated subunit |
| View | Download | 0.403 | b.23.1 | Spermadhesin, CUB domain |
| View | Download | 0.401 | b.60.1 | Lipocalins |
| View | Download | 0.394 | b.49.1 | N-terminal domain of alpha and beta subunits of F1 ATP synthase |
| View | Download | 0.391 | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.391 | b.42.5 | Actin-crosslinking proteins |
| View | Download | 0.388 | d.110.1 | Profilin (actin-binding protein) |
| View | Download | 0.376 | b.113.1 | N-terminal domain of MutM-like DNA repair proteins |
| View | Download | 0.374 | b.60.1 | Lipocalins |
| View | Download | 0.373 | b.55.1 | PH domain-like |
| View | Download | 0.369 | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.363 | d.15.6 | Superantigen toxins, C-terminal domain |
| View | Download | 0.352 | b.50.1 | Acid proteases |
| View | Download | 0.341 | b.60.1 | Lipocalins |
| View | Download | 0.334 | b.38.1 | Sm-like ribonucleoproteins |
| View | Download | 0.309 | d.15.7 | Immunoglobulin-binding domains |
| View | Download | 0.306 | d.15.1 | Ubiquitin-like |
| View | Download | 0.304 | c.55.6 | DNA repair protein MutS, domain II |
| View | Download | 0.302 | d.106.1 | Sterol carrier protein, SCP |
| View | Download | 0.301 | c.97.1 | Cytidine deaminase-like |
| View | Download | 0.300 | c.30.1 | PreATP-grasp domain |
| View | Download | 0.287 | f.4.1 | OMPA-like |
| View | Download | 0.279 | b.60.1 | Lipocalins |
| View | Download | 0.277 | b.54.1 | Core binding factor beta, CBF |
| View | Download | 0.268 | b.42.2 | Ricin B-like lectins |
| View | Download | 0.264 | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.262 | b.76.2 | Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain |
| View | Download | 0.255 | b.60.1 | Lipocalins |
| View | Download | 0.249 | d.21.1 | Diaminopimelate epimerase-like |
| View | Download | 0.248 | d.21.1 | Diaminopimelate epimerase-like |
| View | Download | 0.241 | b.42.2 | Ricin B-like lectins |
| View | Download | 0.237 | b.60.1 | Lipocalins |
| View | Download | 0.228 | b.125.1 | Lipoprotein localization factors LolAB |
| View | Download | 0.227 | b.29.1 | Concanavalin A-like lectins/glucanases |
| View | Download | 0.226 | b.42.6 | IP3 receptor type 1 binding core, domain 1 |
|
Region A: Residues: [696-781] |
1 11 21 31 41 51
| | | | | |
1 VENDPTQLRT PSPGKLVKFL VENGEHIIKG QPYAEIEVMK MQMPLVSQEN GIVQLLKQPG 60
61 STIVAGDIMA IMTLDDPSKV KHALPF
|
| Detection Method: | |
| Confidence: | 12.522879 |
| Match: | 1dczA_ |
| Description: | Biotin carboxyl carrier domain of transcarboxylase (TC 1.3S) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [782-989] |
1 11 21 31 41 51
| | | | | |
1 EGMLPDFGSP VIEGTKPAYK FKSLVSTLEN ILKGYDNQVI MNASLQQLIE VLRNPKLPYS 60
61 EWKLHISALH SRLPAKLDEQ MEELVARSLR RGAVFPARQL SKLIDMAVKN PEYNPDKLLG 120
121 AVVEPLADIA HKYSNGLEAH EHSIFVHFLE EYYEVEKLFN GPNVREENII LKLRDENPKD 180
181 LDKVALTVLS HSKVSAKNNL ILAILKHY
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [990-1091] |
1 11 21 31 41 51
| | | | | |
1 QPLCKLSSKV SAIFSTPLQH IVELESKATA KVALQAREIL IQGALPSVKE RTEQIEHILK 60
61 SSVVKVAYGS SNPKRSEPDL NILKDLIDSN YVVFDVLLQF LT
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.543 | 0.090 | biotin carboxylase activity | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.867 | 0.072 | biotin carboxylase activity | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.615 | 0.043 | biotin carboxylase activity | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.671 | 0.019 | biotin carboxylase activity | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.497 | N/A | N/A | a.51.1 | Cytochrome c oxidase subunit h |
| View | Download | 0.495 | N/A | N/A | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.494 | N/A | N/A | a.24.4 | Hemerythrin |
| View | Download | 0.453 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.452 | N/A | N/A | d.45.1 | ClpS-like |
| View | Download | 0.410 | N/A | N/A | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.370 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.361 | N/A | N/A | a.60.6 | DNA polymerase beta, N-terminal domain-like |
| View | Download | 0.356 | N/A | N/A | d.26.1 | FKBP-like |
| View | Download | 0.352 | N/A | N/A | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.335 | N/A | N/A | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.317 | N/A | N/A | a.7.7 | BAG domain |
| View | Download | 0.315 | N/A | N/A | a.91.1 | Regulator of G-protein signalling, RGS |
| View | Download | 0.312 | N/A | N/A | a.7.8 | GAT domain |
| View | Download | 0.306 | N/A | N/A | a.126.1 | Serum albumin-like |
| View | Download | 0.305 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.297 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.289 | N/A | N/A | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.287 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.280 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.273 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.271 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.260 | N/A | N/A | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.257 | N/A | N/A | a.25.2 | Thermoplasma ferritin-like 4-helical bundle |
| View | Download | 0.255 | N/A | N/A | a.70.1 | N-terminal domain of the delta subunit of the F1F0-ATP synthase |
| View | Download | 0.254 | N/A | N/A | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.248 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.248 | N/A | N/A | a.7.7 | BAG domain |
| View | Download | 0.247 | N/A | N/A | a.83.1 | Guanido kinase N-terminal domain |
| View | Download | 0.246 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.245 | N/A | N/A | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.241 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.241 | N/A | N/A | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.240 | N/A | N/A | d.58.26 | GHMP Kinase, C-terminal domain |
| View | Download | 0.238 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.237 | N/A | N/A | a.158.1 | F-box domain |
| View | Download | 0.235 | N/A | N/A | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.233 | N/A | N/A | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
| View | Download | 0.232 | N/A | N/A | d.39.1 | Dynein light chain 8 (DLC8) |
| View | Download | 0.230 | N/A | N/A | a.71.2 | Helical domain of Sec23/24 |
| View | Download | 0.228 | N/A | N/A | a.77.1 | DEATH domain |
| View | Download | 0.227 | N/A | N/A | d.80.1 | Tautomerase/MIF |
| View | Download | 0.226 | N/A | N/A | a.23.4 | Mitochondrial import receptor subunit Tom20 |
| View | Download | 0.223 | N/A | N/A | a.2.3 | Chaperone J-domain |
| View | Download | 0.218 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.218 | N/A | N/A | a.134.1 | Fungal elicitin |
| View | Download | 0.212 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.211 | N/A | N/A | a.135.1 | Tetraspanin |
| View | Download | 0.208 | N/A | N/A | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.208 | N/A | N/A | d.58.26 | GHMP Kinase, C-terminal domain |
|
Region A: Residues: [1092-1154] |
1 11 21 31 41 51
| | | | | |
1 HQDPVVTAAA AQVYIRRAYR AYTIGDIRVH EGVTVPIVEW KFQLPSAAFS TFPTVKSKMG 60
61 MNR
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.536 | d.17.1 | Cystatin/monellin |
| View | Download | 0.456 | b.34.4 | Electron transport accessory proteins |
| View | Download | 0.483 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.526 | d.71.1 | Cell division protein MinE topological specificity domain |
| View | Download | 0.689 | d.81.1 | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |
| View | Download | 0.450 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.428 | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.426 | d.17.1 | Cystatin/monellin |
| View | Download | 0.410 | d.58.5 | GlnB-like |
| View | Download | 0.383 | d.58.23 | Probable ACP-binding domain of malonyl-CoA ACP transacylase |
| View | Download | 0.368 | b.4.1 | HSP40/DnaJ peptide-binding domain |
| View | Download | 0.357 | d.94.1 | HPr-like |
| View | Download | 0.355 | d.52.7 | Ribosome-binding factor A, RbfA |
| View | Download | 0.350 | d.94.1 | HPr-like |
| View | Download | 0.343 | c.47.1 | Thioredoxin-like |
| View | Download | 0.339 | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.336 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.325 | d.230.2 | Flavin-binding protein dodecin |
| View | Download | 0.322 | d.74.3 | RBP11-like subunits of RNA polymerase |
| View | Download | 0.313 | d.58.17 | Metal-binding domain |
| View | Download | 0.308 | d.17.2 | Copper amine oxidase, domains 1 and 2 |
| View | Download | 0.306 | b.34.5 | Translation proteins SH3-like domain |
| View | Download | 0.305 | d.58.40 | D-ribose-5-phosphate isomerase (RpiA), lid domain |
| View | Download | 0.299 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.294 | d.17.2 | Copper amine oxidase, domains 1 and 2 |
| View | Download | 0.289 | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
| View | Download | 0.276 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.267 | d.121.1 | DNA topoisomerase I domain |
| View | Download | 0.266 | d.52.5 | Probable GTPase Der, C-terminal domain |
| View | Download | 0.255 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.255 | d.58.12 | eEF-1beta-like |
| View | Download | 0.255 | d.58.8 | Viral DNA-binding domain |
| View | Download | 0.253 | a.60.2 | RuvA domain 2-like |
| View | Download | 0.250 | a.60.11 | Hypothetical protein YjbJ |
| View | Download | 0.249 | c.47.1 | Thioredoxin-like |
| View | Download | 0.248 | d.201.1 | SRP19 |
| View | Download | 0.242 | d.89.1 | Origin of replication-binding domain, RBD-like |
| View | Download | 0.241 | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.232 | c.47.1 | Thioredoxin-like |
| View | Download | 0.228 | d.58.17 | Metal-binding domain |
| View | Download | 0.225 | b.1.1 | Immunoglobulin |
| View | Download | 0.222 | d.58.17 | Metal-binding domain |
| View | Download | 0.213 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.208 | d.58.5 | GlnB-like |
| View | Download | 0.208 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.204 | d.50.2 | Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain |
| View | Download | 0.203 | c.47.1 | Thioredoxin-like |
| View | Download | 0.202 | d.58.13 | Anticodon-binding domain of PheRS |
| View | Download | 0.202 | b.38.1 | Sm-like ribonucleoproteins |
| View | Download | 0.202 | d.58.5 | GlnB-like |
|
Region A: Residues: [1155-1328] |
1 11 21 31 41 51
| | | | | |
1 AVSVSDLSYV ANSQSSPLRE GILMAVDHLD DVDEILSQSL EVIPRHQSSS NGPAPDRSGS 60
61 SASLSNVANV CVASTEGFES EEEILVRLRE ILDLNKQELI NASIRRITFM FGFKDGSYPK 120
121 YYTFNGPNYN ENETIRHIEP ALAFQLELGR LSNFNIKPIF TDNRNIHVYE AVSK
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| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1329-1527] |
1 11 21 31 41 51
| | | | | |
1 TSPLDKRFFT RGIIRTGHIR DDISIQEYLT SEANRLMSDI LDNLEVTDTS NSDLNHIFIN 60
61 FIAVFDISPE DVEAAFGGFL ERFGKRLLRL RVSSAEIRII IKDPQTGAPV PLRALINNVS 120
121 GYVIKTEMYT EVKNAKGEWV FKSLGKPGSM HLRPIATPYP VKEWLQPKRY KAHLMGTTYV 180
181 YDFPELFRQA SSSQWKNFS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1528-2146] |
1 11 21 31 41 51
| | | | | |
1 ADVKLTDDFF ISNELIEDEN GELTEVEREP GANAIGMVAF KITVKTPEYP RGRQFVVVAN 60
61 DITFKIGSFG PQEDEFFNKV TEYARKRGIP RIYLAANSGA RIGMAEEIVP LFQVAWNDAA 120
121 NPDKGFQYLY LTSEGMETLK KFDKENSVLT ERTVINGEER FVIKTIIGSE DGLGVECLRG 180
181 SGLIAGATSR AYHDIFTITL VTCRSVGIGA YLVRLGQRAI QVEGQPIILT GAPAINKMLG 240
241 REVYTSNLQL GGTQIMYNNG VSHLTAVDDL AGVEKIVEWM SYVPAKRNMP VPILETKDTW 300
301 DRPVDFTPTN DETYDVRWMI EGRETESGFE YGLFDKGSFF ETLSGWAKGV VVGRARLGGI 360
361 PLGVIGVETR TVENLIPADP ANPNSAETLI QEPGQVWHPN SAFKTAQAIN DFNNGEQLPM 420
421 MILANWRGFS GGQRDMFNEV LKYGSFIVDA LVDYKQPIII YIPPTGELRG GSWVVVDPTI 480
481 NADQMEMYAD VNARAGVLEP QGMVGIKFRR EKLLDTMNRL DDKYRELRSQ LSNKSLAPEV 540
541 HQQISKQLAD RERELLPIYG QISLQFADLH DRSSRMVAKG VISKELEWTE ARRFFFWRLR 600
601 RRLNEEYLIK RLSHQVGEA
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| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [2147-2233] |
1 11 21 31 41 51
| | | | | |
1 SRLEKIARIR SWYPASVDHE DDRQVATWIE ENYKTLDDKL KGLKLESFAQ DLAKKIRSDH 60
61 DNAIDGLSEV IKMLSTDDKE KLLKTLK
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.418 | a.28.1 | ACP-like |
| View | Download | 0.492 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.509 | a.46.1 | Methionine synthase domain |
| View | Download | 0.466 | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.394 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.358 | c.9.1 | Barstar (barnase inhibitor) |
| View | Download | 0.342 | a.85.1 | Hemocyanin, N-terminal domain |
| View | Download | 0.334 | a.64.1 | Saposin |
| View | Download | 0.307 | a.74.1 | Cyclin-like |
| View | Download | 0.289 | a.51.1 | Cytochrome c oxidase subunit h |
| View | Download | 0.271 | a.7.8 | GAT domain |
| View | Download | 0.265 | a.4.3 | ARID-like |
| View | Download | 0.261 | a.105.1 | FIS-like |
| View | Download | 0.260 | a.7.1 | Spectrin repeat |
| View | Download | 0.256 | a.118.1 | ARM repeat |
| View | Download | 0.245 | a.47.2 | t-snare proteins |
| View | Download | 0.244 | a.2.3 | Chaperone J-domain |
| View | Download | 0.242 | a.7.1 | Spectrin repeat |
| View | Download | 0.242 | a.77.1 | DEATH domain |
| View | Download | 0.241 | a.25.1 | Ferritin-like |
| View | Download | 0.240 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.238 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.234 | c.47.1 | Thioredoxin-like |
| View | Download | 0.233 | a.126.1 | Serum albumin-like |
| View | Download | 0.227 | a.105.1 | FIS-like |
| View | Download | 0.226 | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.223 | a.58.1 | Chemotaxis receptor methyltransferase CheR, N-terminal domain |
| View | Download | 0.222 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.220 | a.7.1 | Spectrin repeat |
| View | Download | 0.219 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.215 | d.95.2 | Homing endonucleases |
| View | Download | 0.215 | a.22.1 | Histone-fold |
| View | Download | 0.204 | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.203 | a.4.3 | ARID-like |
| View | Download | 0.201 | a.60.2 | RuvA domain 2-like |
